Gene Pden_3208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3208 
Symbol 
ID4581772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp372102 
End bp372653 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content58% 
IMG OID639770532 
Producthypothetical protein 
Protein accessionYP_916985 
Protein GI119385930 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGGA CCGAGGCTGG CGAGCAGAAC GCAATCTATC GAAGCGTCGA TCGGGTCGTG 
TCCGTTCTGG AAAACATCTG CGCCATCCTG GCGGGCATCA TCCTGCTCTT CATGATGGTC
ATCGTCTCAC TCGACGCGAT CTTCCGCTAC CTGTTTCATG CACCGATCGC CTTCCAATAC
ACCTTGACGG AAGACTACCT CATGGTAGCA GTCGTTAGCT TGGCTCTGTC CTGGGGGTTC
CGGACCGGTG GCTTCATCCG CATAACCGGG ATCACCAACA TGCTGCCCGG CTGGATGCAG
GCATTCGTCT TCCGCCTCGG TCTCGTCCTA GGCTTTCTTT ACGTGTTTGC CTTGGCCTGG
ACCAGCGGAG GGGCGTTCCA GAAGGTCTGG ACCACGGGCG AAGTGCGGAT CGGGGTGATA
GACTGGCCGG TCTATCTTTC ATGGATTTGG GTTCCGCTCG GATGCGGCCT GCTGGCGATC
CGGGTTCTGC TGACAGCTTT CGCTCCTGCT GCCGAGATTT GCGCCGATCC CCACGCAGAA
TCAGAAATAT AA
 
Protein sequence
MIGTEAGEQN AIYRSVDRVV SVLENICAIL AGIILLFMMV IVSLDAIFRY LFHAPIAFQY 
TLTEDYLMVA VVSLALSWGF RTGGFIRITG ITNMLPGWMQ AFVFRLGLVL GFLYVFALAW
TSGGAFQKVW TTGEVRIGVI DWPVYLSWIW VPLGCGLLAI RVLLTAFAPA AEICADPHAE
SEI