| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3207 |
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| Symbol | |
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| ID | 4581771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 370806 |
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| End bp | 372089 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639770531 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_916984 |
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| Protein GI | 119385929 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCTA CATTCGGACT TGGCGTCCTG GTTCTTCTTC TGCTGATCGC ATTGGCCGTC
CCCATCGGCT TTGCACTCGG TCTGGGGGGC GTACTTTCCC TTGGTATGCT GGTGCCCACC
GGCACGATCG AGGCCCTCAT GTCCAAGGTC GTCCGCGACA CATCTGCGAG CTACGTGTTC
CTGACCATCC CCATGTTTGT ACTGATGGCG GAATTCCTTT CCGTGGGGCG AGTGGCGGAG
GATCTATTCC TTTCCTGCAA CCGAGTCCTG CGCAAGATCC GCGGTGGCAT GGCGATGGCC
GTTATCGTGG CCGGCGCGAT CCATGCGGCG GTGACGGGCT CCAGCACCGC CTCGGCGGCC
AGCCTCTCGC GCGCCTCCTA TCCCGCGATG CGGCGGGCAG GCTATGATCC GGGCTTTGCC
GTGGGAACGG CAGCCATCGC CGGCACGCTT GCGGTGATGA TCCCACCCTC AACGGCCTTC
ATCCTCTACA GCCTGATGAC GGACACATCG GTCGGCAAGC TCTTCATCGC CGGGATCATT
CCGGGAGCCA TCACCGCAGT CGGTTACATC GTGACTATCT CGCTGGTGCT GAAGTATCGT
CCCCATCTCG GTCCCAAGCC GGGCGCCGAG GTGGAGGCAG CCAAACACCG CACCAGCGGT
CGTGTCTGGC CGGTCGTGCT TTTGATCGCG GTCGTCGTCG GCGCCCTCTA TGCCGGCATC
GCCACCCCAA CCGAGGTCGC GGCCATCGGC GCTGCGGGAG CGTTGCTCGT CTCGCTATCG
ACCAAGAGGA TGACCAGGCA TGGTTTCCTG GATGCCGTCG GCACGACGCT GCGCATCACC
ACGATGATTA TCACGATCAT CTTTGGTGCC CACCTCTTCG GCTATTTCAT TTCGTTCTCG
CAAATAACGA CGATGATGCT GCAATGGATC GCCGACAGCG GTATTTCGCC CACCATGGTC
ATGCTGCTTG TGGTCTTCGT GTACTTGCTG CTTGGCATGG TCATGGATCA GGCCGCAATC
ATCATCCTGA CCGCGCCGAT TTCGACTGCG CTGATGGTGG GGCTTGGCTA TGATCCCATC
TGGTGGGGGG TGATCATCAT CAAGACTGCC GAGATCGGCC TCGTGTCGCC GCCGCTCGGT
TTGGTGACCT TCGTTGTCTC GGCCACCAGC AAGGTCGATC TGCGACGCAG CTTCATCGGG
GTATTGCCCT ACCTCGTGAT GGAGATCATC ATTCTGACAC TGCTGCTTGC GTTCCCGCAG
CTTTCGTTGG TTCTCACGGG GTAG
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| Protein sequence | MAATFGLGVL VLLLLIALAV PIGFALGLGG VLSLGMLVPT GTIEALMSKV VRDTSASYVF
LTIPMFVLMA EFLSVGRVAE DLFLSCNRVL RKIRGGMAMA VIVAGAIHAA VTGSSTASAA
SLSRASYPAM RRAGYDPGFA VGTAAIAGTL AVMIPPSTAF ILYSLMTDTS VGKLFIAGII
PGAITAVGYI VTISLVLKYR PHLGPKPGAE VEAAKHRTSG RVWPVVLLIA VVVGALYAGI
ATPTEVAAIG AAGALLVSLS TKRMTRHGFL DAVGTTLRIT TMIITIIFGA HLFGYFISFS
QITTMMLQWI ADSGISPTMV MLLVVFVYLL LGMVMDQAAI IILTAPISTA LMVGLGYDPI
WWGVIIIKTA EIGLVSPPLG LVTFVVSATS KVDLRRSFIG VLPYLVMEII ILTLLLAFPQ
LSLVLTG
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