Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3206 |
Symbol | |
ID | 4581770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 369824 |
End bp | 370534 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639770530 |
Product | regulatory protein GntR, HTH |
Protein accession | YP_916983 |
Protein GI | 119385928 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAGAA GCAAATCGGA GTACGTCGCG CAGCGGCTCT TGGATCGGAT CATCACGGAT AATTTAGCTT CCGGATCATA TCTTGGCACC GAAGCTGAGC TGTTACAGCA ATTCAATGTG AGCCGTCCGA CTCTACGTGA AAGCCTGCGA ATCCTCGAGA CTCAGGGGGT CATTGAACTT CGGCCAGGAC CTGGTGGCGG CATCATGATT ACGCGGCCCG GCACCGATAT TGTTGCTCAT GGGCTTTCGG TCTATCTCAG GGTTCATGGT ATTCCCGACA CGACAATGCA TAGGGCGTTG ATCGCACTCC AACCAGCGCT TATCGCACAG GCGGCAGAAA TGGGTTCCGC TGATGATTTC GATGCGCTTG ACGCGGTGGT TGAGAAAATG AGATTGACAA GTGATCTCCG TGAGTTGCGT CAAGAGTTGC GTCATTTTTA TCTGCTGATT GCCCGTGCCA CTCAAAATCA GATACTGGAT ATATTCTGGT CCACTCTCGA CAAACTGAGT GGTGGTCCCG CCTCCACACT CGAAGGCGAA AAAATCACAG CAGCCGGTCG GCAACGGATC GTTGCCTTGC ACGGTGAAAT GGTCAGCGCA TGTCGCGCAA AGGATCCTTC GACAGCATCG GCGCTGTTGA ATGCCCTGCT TAGCGCCCCA TCACCGTCGC AGACACAAAG CCGACGGCGG CAGGCTCGGA GTGAAGCCTA G
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Protein sequence | MPRSKSEYVA QRLLDRIITD NLASGSYLGT EAELLQQFNV SRPTLRESLR ILETQGVIEL RPGPGGGIMI TRPGTDIVAH GLSVYLRVHG IPDTTMHRAL IALQPALIAQ AAEMGSADDF DALDAVVEKM RLTSDLRELR QELRHFYLLI ARATQNQILD IFWSTLDKLS GGPASTLEGE KITAAGRQRI VALHGEMVSA CRAKDPSTAS ALLNALLSAP SPSQTQSRRR QARSEA
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