Gene Pden_3206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3206 
Symbol 
ID4581770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp369824 
End bp370534 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content54% 
IMG OID639770530 
Productregulatory protein GntR, HTH 
Protein accessionYP_916983 
Protein GI119385928 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAGAA GCAAATCGGA GTACGTCGCG CAGCGGCTCT TGGATCGGAT CATCACGGAT 
AATTTAGCTT CCGGATCATA TCTTGGCACC GAAGCTGAGC TGTTACAGCA ATTCAATGTG
AGCCGTCCGA CTCTACGTGA AAGCCTGCGA ATCCTCGAGA CTCAGGGGGT CATTGAACTT
CGGCCAGGAC CTGGTGGCGG CATCATGATT ACGCGGCCCG GCACCGATAT TGTTGCTCAT
GGGCTTTCGG TCTATCTCAG GGTTCATGGT ATTCCCGACA CGACAATGCA TAGGGCGTTG
ATCGCACTCC AACCAGCGCT TATCGCACAG GCGGCAGAAA TGGGTTCCGC TGATGATTTC
GATGCGCTTG ACGCGGTGGT TGAGAAAATG AGATTGACAA GTGATCTCCG TGAGTTGCGT
CAAGAGTTGC GTCATTTTTA TCTGCTGATT GCCCGTGCCA CTCAAAATCA GATACTGGAT
ATATTCTGGT CCACTCTCGA CAAACTGAGT GGTGGTCCCG CCTCCACACT CGAAGGCGAA
AAAATCACAG CAGCCGGTCG GCAACGGATC GTTGCCTTGC ACGGTGAAAT GGTCAGCGCA
TGTCGCGCAA AGGATCCTTC GACAGCATCG GCGCTGTTGA ATGCCCTGCT TAGCGCCCCA
TCACCGTCGC AGACACAAAG CCGACGGCGG CAGGCTCGGA GTGAAGCCTA G
 
Protein sequence
MPRSKSEYVA QRLLDRIITD NLASGSYLGT EAELLQQFNV SRPTLRESLR ILETQGVIEL 
RPGPGGGIMI TRPGTDIVAH GLSVYLRVHG IPDTTMHRAL IALQPALIAQ AAEMGSADDF
DALDAVVEKM RLTSDLRELR QELRHFYLLI ARATQNQILD IFWSTLDKLS GGPASTLEGE
KITAAGRQRI VALHGEMVSA CRAKDPSTAS ALLNALLSAP SPSQTQSRRR QARSEA