Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3202 |
Symbol | |
ID | 4581766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 366385 |
End bp | 367428 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639770526 |
Product | conjugal transfer protein TrbG/VirB9/CagX |
Protein accession | YP_916979 |
Protein GI | 119385924 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.243978 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCAA TTCGCTTCGA ACGATTGGTT GGCGACAGGA CGGGATCGCT GAGCAAATCC GCAATCCTTC CTGTCGTGGT ACTCGCGATG ACCACACTCG CCGGCTGCGC CACGACCAAA ACGCCACAGT TCAGCTATGA CGACCACGTG CCGCCATTGC CATCGCCGCC CGCCGCCGTT GCCGATCCGG CTCCGGAACC GCTGCATGTG CCGCCGGACT GGACCCCGGC GAAGGGTGGG AATGCAGCGG AAAGCCCGGC AGGCCAGGTT ACGAACGCCA ACCTCGCCGC CCGGGTGGAG CCGCGCCGGG AGGGCTATTA CAACGCCATC CAGGTCTATC CGTGGAGCGA AGGCGCGCTC TATCAGATCT ATGCGGCGCC GGGGCAGATC ACCGATATCG CGCTGGAGCC GGGCGAGCGC CTGACCAGCA CCGGTCCCAT CGCCGCAGGC GACACCGCCC GCTGGATCAT CGGCGATACG GAGAGCGGCA GCGGCGCGTC CCGCCGCGTG CATGTGCTGG TCAAGCCGAC CCGGCCCGAG ATCAGCACCA ATCTGGTCAT CGCCACCGAC CGGCGCCGCT ACATGCTGGA ATTGCGCGCC GACGAAGAAA CCTGGATGCC GGCGGTGTCG TGGCATTATC CGGAAAGCGC GTCTGCGGCC GCACAGCGTC GCGCGGCTCC TGCCGCGCCG GTGATTCCGG GGAAGGCTGC GCGCAACCAT CGCTACGGCT TGCAGGTCCT AGGCGCGAGC CCGCCCTGGC GCCCGGTCTC GGTCTTCGAC GACGGCCGCC GGGTCCATGT GGTCTTCCCG CCCGGCATCG CCCAGGGCGA GATGCCGCCC CTCTTTGTCA TCGGCCCGGA CGGCGCCCCC GAGATCGTCA ACAGCCGTGT CCACGGCAAT GTGCTGATCG TGGACCGGCT CTTCGGCGTG GCCGAACTGC GCCTCGGCTC GGGAAAACGC CAGCAGGTGG TCAGGATTAT CCGTATGGAA CAGACACGGG CGGCCATCCA GCCGACCCGT GCGCCGACGA AAGGATCGTC CTGA
|
Protein sequence | MTAIRFERLV GDRTGSLSKS AILPVVVLAM TTLAGCATTK TPQFSYDDHV PPLPSPPAAV ADPAPEPLHV PPDWTPAKGG NAAESPAGQV TNANLAARVE PRREGYYNAI QVYPWSEGAL YQIYAAPGQI TDIALEPGER LTSTGPIAAG DTARWIIGDT ESGSGASRRV HVLVKPTRPE ISTNLVIATD RRRYMLELRA DEETWMPAVS WHYPESASAA AQRRAAPAAP VIPGKAARNH RYGLQVLGAS PPWRPVSVFD DGRRVHVVFP PGIAQGEMPP LFVIGPDGAP EIVNSRVHGN VLIVDRLFGV AELRLGSGKR QQVVRIIRME QTRAAIQPTR APTKGSS
|
| |