| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3201 |
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| Symbol | |
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| ID | 4581765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 365699 |
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| End bp | 366388 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639770525 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_916978 |
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| Protein GI | 119385923 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.325198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCCT TCAGACGCTC GACCACCCAT TACGGCGAGA CACCCGAACC CGAGACGCCC
TATCAGAAGG CGGCGCAGGT CTGGGACGAG CGCATCGGCT CGGCCCGGGT GCAGGCCAGG
AACTGGCGGC TGATGGCCTT CGCCTGCCTG TTCCTGGCCG CCGGCTTTGC CGGGGCGCTG
GTCTGGCAAT CGGCGCGTGG CACTGTCGTA CCTTGGGTGG TGCAGGTCGA CGATCTGGGG
CAGGCGCAGA CCGTGGCCGC CGCCACGGCG GATTACCGCC CGACCGATCC GCAGATCGCC
TGGCATCTCG GCCGTTTCAT CGAGCAGGTC CGGTCTATCC CGGCCGATCC GGTCATCCTG
CGCCAGAACT GGCTCCAGGC CTATGACTGG ACCACCGATC GCGGCGCCGC GGCGCTGAAC
GACCATGCCC GCGGCAACGA TCCCTTCTCG AAGCTGGGCG AGCGGCAGAT CTCGGTCGAG
GTCTCCTCGG TCATCCGCGC CTCGCCGGAC AGCTTCCGGG TCGCCTGGAC GGAAAAGCGC
TACGAGAACG GCCAGTTGTC TACGACCGAA CGCTGGACCG CGATCCTGAC TATCGGCATC
CAGACACCCC GCACCGCCGA GGCCCTGCGC GCCAATCCGC TCGGCATCTA CGTCAATGCG
ATCTCATGGT CGCGGGAGAT GAGCCAATGA
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| Protein sequence | MNPFRRSTTH YGETPEPETP YQKAAQVWDE RIGSARVQAR NWRLMAFACL FLAAGFAGAL
VWQSARGTVV PWVVQVDDLG QAQTVAAATA DYRPTDPQIA WHLGRFIEQV RSIPADPVIL
RQNWLQAYDW TTDRGAAALN DHARGNDPFS KLGERQISVE VSSVIRASPD SFRVAWTEKR
YENGQLSTTE RWTAILTIGI QTPRTAEALR ANPLGIYVNA ISWSREMSQ
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