| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3187 |
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| Symbol | |
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| ID | 4581751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 352908 |
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| End bp | 354701 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639770511 |
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| Product | hypothetical protein |
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| Protein accession | YP_916964 |
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| Protein GI | 119385909 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAG ACGATCACGA GTTCCGCATC CGTCCGGGCA GGCCGCGCTC GACCCCGGCG
CCACGCAGCG GCAGCTTCGT CAATCAGGTG CTGCGCGCGG CACGGAAGGC GGGGCCGGTC
AGGGCGTGGT CCTCCAAATC GAAAGGGTTT CCCCGCCCCG GTCACTCCAC CTTCGGGCGC
GGGCGCGCCG GCTTCGGCCG CTCGCGGCTG TTCTCGCCCC AGCGCCGGGT GGTGGTGAAA
GCGCGGGTGG TCCGGCACAG GGGCCGGTCC TTCCGCTCGG CGCCGATGAC GGCGCATCTC
AGCTATCTCA AACGCGAGGG CGTCAGCCGC GACGACAGCG ACGGGCTGAT GTTCGATGCC
ACCTCCGACG ATGCCGACGA TTCCGCCTTC GCCGAACGCT GCCAGGACGA CCGGCACCAT
TTCCGCTTCA TCGTCTCGCC CGAGGATGCG TCCGACATGA CCGATCTGCG CGCCTTCACC
CGCGATCTGG TCAGGCAGAT GGAGGCCGAT CTTGGCACGA AACTGGACTG GATCGCCGCC
GATCACTGGA ACACCGACAA TCCGCATGTG CATCTGCTGG TCCGTGGCGT GGATGACGGC
GGCAAGGATC TGGTGATTTC GCGCGACTAT ATCAGCTACG GCTTGCGCTC CCGCGCCGAG
GATCTCGTCT CCATCGAACT CGGCCCCAGG CAGGAACACG AGATCCGCTC GGCCCTGGAA
CGCGAGGTGA CGGCGGAACG CTGGACCCGG CTCGATGCGG CGATCCGGCG CCAGGCCGAC
GATCTGGGAT TCATCGATCT GCGCCCCGAT GCGCCAATCC GGGGCGAACC CACCGGGCGG
AGTCCCGAAC CTCGGCGATT GATGATCGGG CGGCTGCAAC ATCTGGAGAA GATGGGTCTC
GCCACATTGG CCGGTCCCGG CGAATGGATG CTGGGGCTGG AGGCGGAGAC CACCCTGCGC
GACCTCGGCC GGCGTGGCGA CATCGTCAGC CGGATGCACC GGGCCTTCGC CGCCCGCGAC
GAGGAACGGG GCGTTCTGGA CTATGTCACC GACAGCGGCC AGGACGGCGC GTCCGTTATC
GGCCGGCTGG TCGATCTGGG CCTGCATGAC GAACTGACCG GCGAGGCCTA TGCGGTGATC
GACGGCACCG ACGGCCGCGC CCATCATATC CGCCTGCGCG GGATCGAGGC CTTCGATCAG
GCCCCGCCGC TCGGCGGCAT CGTCGAACTG CGCCGCTTCG GCGGGCCGGA GGATCCGAAC
CCGACCCTGC GGCTCGCCCA TCGTTCCGAT CTCGATCTGC AAGCCCAGAT CGCCGCGCCC
GGCGCCACCT GGCTCGATTA CCGGCTGGTC GAGCGCAAAC CGATGCCGCT GGCCATGGGC
GGTTTCGGCA AGGAGGTGCG CGAGGCGATG GATGCCCGCG CCGAGCATCT GGTCGGGGAA
GGCCTCGCCC GGCGCGAGGG TGGGCGCATC CTGGTGCGGC GCCATCTGCT CGCAACCCTG
CGCCGCCGCG AACTCGATGC CGTCGGCGCC GATCTCGCCC GGAAAACCGG GCTGCCGCAT
GTGCAGGCCC GGCCCGGCGA TCATGTCGCC GGCACCTGCG GCCGGCGGAT GTCGCTCTCC
TCGGGCCGCT TCGCCGTCAT CGAGGGTTCC GGACCCGGCG GAGGCCTGGG CTTTCAGCTG
GTGCCCTGGT CGCGGGATCT CGAAGGCCAG CTCGGTCGGC ATGTCTCCGG CGTGGCGAAA
CCCGGCGGCG GCATCGACTG GTCGCTTGGG CGCAGGCGCG ACCTCGGCCT CTGA
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| Protein sequence | MSADDHEFRI RPGRPRSTPA PRSGSFVNQV LRAARKAGPV RAWSSKSKGF PRPGHSTFGR
GRAGFGRSRL FSPQRRVVVK ARVVRHRGRS FRSAPMTAHL SYLKREGVSR DDSDGLMFDA
TSDDADDSAF AERCQDDRHH FRFIVSPEDA SDMTDLRAFT RDLVRQMEAD LGTKLDWIAA
DHWNTDNPHV HLLVRGVDDG GKDLVISRDY ISYGLRSRAE DLVSIELGPR QEHEIRSALE
REVTAERWTR LDAAIRRQAD DLGFIDLRPD APIRGEPTGR SPEPRRLMIG RLQHLEKMGL
ATLAGPGEWM LGLEAETTLR DLGRRGDIVS RMHRAFAARD EERGVLDYVT DSGQDGASVI
GRLVDLGLHD ELTGEAYAVI DGTDGRAHHI RLRGIEAFDQ APPLGGIVEL RRFGGPEDPN
PTLRLAHRSD LDLQAQIAAP GATWLDYRLV ERKPMPLAMG GFGKEVREAM DARAEHLVGE
GLARREGGRI LVRRHLLATL RRRELDAVGA DLARKTGLPH VQARPGDHVA GTCGRRMSLS
SGRFAVIEGS GPGGGLGFQL VPWSRDLEGQ LGRHVSGVAK PGGGIDWSLG RRRDLGL
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