Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3162 |
Symbol | |
ID | 4581726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 336263 |
End bp | 337168 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639770486 |
Product | integrase catalytic subunit |
Protein accession | YP_916939 |
Protein GI | 119385884 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.116464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.334205 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGGTT TCATCGACGC GCATCGGGAT GCGCACGGGG TCGAGCCGAT CTGCGACGTT CTGCCGATCG CCCCTGCCAC CTATTATGAC CATCTGGCCA AACGTGCCGA CCCGGCGCGG TTGTCGGATC GTGCCAAACG GGACGAGGCG CTGCGCCCCG AGATACGGCG TGTTTTCGAG GACAACTGGA GCGTCTACGG CCTGCGCAAG GTCTGGCACC AGCTGCGCCG CGAGGGCTTC GATATCGCTT GCTGCACGGT GGCACGGCTG ATGAAGGACA TGGGCATTCA AGGCATTGTC CGGGGCAAGC CGCACAAGAC GACGATCCCT GACAAGAAGC AGCCATGCCC GCTGGACAAG GTGAACCGCC AGTTCCGCGT GCCTGCGCCG AACATGCTGT GGGTCAGCGA TTTCACCTAT GTTGCCACCT GGAAGGGGTT TGTTTATGTC GCTTTCGTCA TCGACGCTTA TGCCCGCAAG ATTGTCGGCT GGCGGGTCAG CACCTCGGCG TATGCCGGGT TCGTCCTTGA TGCCCTCGAA CAGGCGGTCC ATGACCGCCG CCCGGTCAAG GGCATGGGGC TGGTTCACCA CAGCGACCGC GGCAGCCAGT ATCTGTCGAT CAAATACACT GAACGGCTGG CCGAGGCGGG CATCGAGCCT TCGGTTGGCA GCGTCGGTGA CAGCTACGAC AACGCGCTGG CCGAGACGAT CAACGGGCTC TTCAAGGCCG AGGTCATCCA CCGTCGGGGG CCCTGGCGCA GCTTCGAGGC CGTGGAATAC GCAACCCTCG AATGGGTGGA CTGGTTCAAC AACCGCCGCC TGCTCGAGCC GATCGGGAAC ATCCCGCCCG CCGAAGCCGA GGCAAACTTC TACGCGGCTC TGGAAACTGA AGCCATGGCC GCGTAA
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Protein sequence | MVGFIDAHRD AHGVEPICDV LPIAPATYYD HLAKRADPAR LSDRAKRDEA LRPEIRRVFE DNWSVYGLRK VWHQLRREGF DIACCTVARL MKDMGIQGIV RGKPHKTTIP DKKQPCPLDK VNRQFRVPAP NMLWVSDFTY VATWKGFVYV AFVIDAYARK IVGWRVSTSA YAGFVLDALE QAVHDRRPVK GMGLVHHSDR GSQYLSIKYT ERLAEAGIEP SVGSVGDSYD NALAETINGL FKAEVIHRRG PWRSFEAVEY ATLEWVDWFN NRRLLEPIGN IPPAEAEANF YAALETEAMA A
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