| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3148 |
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| Symbol | |
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| ID | 4581712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 325116 |
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| End bp | 326492 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639770472 |
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| Product | protease Do |
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| Protein accession | YP_916925 |
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| Protein GI | 119385870 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.398511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATGA AAATCCCCCG ACTGCGCGCG GCCGTCATCA CGCTGTGCAC GATCCTGGCG
CTGGTCGCGC CGCCCCAAGC GGCTGTCGGG CAGCCCATGC CCGAGGCTGG GGGCGGTATT
CCCACCATTG CCCCGATGCT GTCGCGCGTG ACCCCGGCGG TGGTCAATAT CGCGGTGGTC
TCGGAAACCC CGGTAGTATC GAACCCGCTT TACAACGATC CCTATTTCCG CCGCTTCTTC
GATCTTCGCG ACCCGCCGAT GCGGCGGCAG ATGAGCGCCG GCTCCGGCGT GATCGTCGAT
GCCGAAAACG GCTATGTGCT GACCAACCAT CACGTCGTCG CCGAGGCCAG CGCGATCAGC
GTCACCCTGA AGGACGGGCG CCAGTTCCGG GCCGAGCTCG TCGGCGCCGA CCAGGCCACG
GAAATCGCCC TGCTGCGGAT CGAGGCCGAG GATCTGGTCG CGCTGGAGAT CGGCGATTCC
GACCGCCTTC AGGTCGGCGA TTTCGTCGCC GCCATCGGCA ACCCCTTCGG CCTGGGCCAG
ACGGTGACCT CGGGCATCGT CAGCGCGCTG GGGCGCAGCG GCATCAGCCG CGAGGGCTAT
GAGGATTTCA TCCAGACCGA CGCCTCGATC AACCCGGGCA ATTCGGGCGG CGCGCTGGTG
ACGCTGGACG GCCGGCTGGT CGGCATCAAC ACCGCCATCC TGACCCCGGC AGGGGGCAAT
ATCGGCATCG GCTTCGCGGT GCCCAGCAAC ATGGCCGTCG CGGTGATGCG GCAGCTGATC
GAGCACGGCG AGGTGCGGCG CGGCAGGCTG GGCATCGGCA TGCACGATCT GACGCCCGAC
CTGGCCGAGG CGCTGGAGCT GGGCGGCATC CACGGCGCGG TGATCGCGAA TGTCGAGCCC
GGCTCTCCCG CCGAGAAGGC GGGGCTGAAG GCGGGGGACG TGGTGACCGC TGTCGACGGC
GCCCCGGTGC AGGGCGCCAC GCATCTGCGA AACCGGCTGG GCCTGACGCC CGTCGGCAGC
ACCATCCGCC TGACGGTCAG GCGCGAGGGG GATGCGCGGG AGGTCGACCT GACCATCACC
GCCGATGCGA CCTCCTCCGG TGATTTCGCC GGCACGCCGC TGGATGGCGC CCGGCTGCGC
AACGCCTCGG CGGAGGAGGC GCGCCGGGCG GGGGGTGCCG GGATCATGGT CGACAGCGTC
GAGCCGGACA GCCTTGCGGC CTGGATCGGC CTGCGCCGCG GCGACATGAT CGTCGCCGTC
AACCGGACGC CGGTTTCCTC GGTCGCGGAT TTGCGTGACA TGCTTGCCGG CCACCGAGCC
GTCGCGGCGC TGGAACTGAT CCGCGACGGC AGCCGTCTTT TCATCGTCGC AAGGTGA
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| Protein sequence | MSMKIPRLRA AVITLCTILA LVAPPQAAVG QPMPEAGGGI PTIAPMLSRV TPAVVNIAVV
SETPVVSNPL YNDPYFRRFF DLRDPPMRRQ MSAGSGVIVD AENGYVLTNH HVVAEASAIS
VTLKDGRQFR AELVGADQAT EIALLRIEAE DLVALEIGDS DRLQVGDFVA AIGNPFGLGQ
TVTSGIVSAL GRSGISREGY EDFIQTDASI NPGNSGGALV TLDGRLVGIN TAILTPAGGN
IGIGFAVPSN MAVAVMRQLI EHGEVRRGRL GIGMHDLTPD LAEALELGGI HGAVIANVEP
GSPAEKAGLK AGDVVTAVDG APVQGATHLR NRLGLTPVGS TIRLTVRREG DAREVDLTIT
ADATSSGDFA GTPLDGARLR NASAEEARRA GGAGIMVDSV EPDSLAAWIG LRRGDMIVAV
NRTPVSSVAD LRDMLAGHRA VAALELIRDG SRLFIVAR
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