Gene Pden_3146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3146 
Symbol 
ID4581710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp324049 
End bp324552 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content64% 
IMG OID639770470 
Productheat shock protein Hsp20 
Protein accessionYP_916923 
Protein GI119385868 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.754957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTCC GTGATCTGAT CCCCTGGAAC CGCAATGGCG GCAACCAGCT TCCCACCGCC 
TTCCGCGACG GCGACCGCGA TCCCTTCCTG TCGCTGCATC GCGAGGTGAA CCGGCTGTTC
GACGACGTCT TCCGCGGCTT CGGCCTGCCC GCGGTCGGCA CGGTCCCTGC CTTTGGCGGC
GGCTGGCCGA GCGTCGAGAT CTCCGACAAC GAGAAGGAGA TCAGGGTGAC GGCCGAGGTG
CCGGGCCTTG ACGAGAAGGA CATCGAAGTC CTGCTGGATG ACGGCGTGCT GACGCTGAAG
GGCGAGAAAC GCTCGGAGGT CGAGGATAAG GACCGGCAAT TCTCGGAACG CTTTTACGGC
CGTTTCGAGC GCCGTATCCC GCTGGGCGCC GAGATCCGCG AGGACGAGGT CGATGCGCAT
TTCAGGAACG GCGTGCTGAC CGTGACCCTG CCCAAGACGG AAAAGGCGCA GTCGCAGGTC
AAGCGCATCG CCATCAAGGG CTGA
 
Protein sequence
MNVRDLIPWN RNGGNQLPTA FRDGDRDPFL SLHREVNRLF DDVFRGFGLP AVGTVPAFGG 
GWPSVEISDN EKEIRVTAEV PGLDEKDIEV LLDDGVLTLK GEKRSEVEDK DRQFSERFYG
RFERRIPLGA EIREDEVDAH FRNGVLTVTL PKTEKAQSQV KRIAIKG