Gene Pden_3120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3120 
Symbol 
ID4581684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp303759 
End bp304643 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content70% 
IMG OID639770444 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_916897 
Protein GI119385842 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGACG TGATCGTGAT CGGGGGCAGC TATGCCGGGA TGGCCGCCGC CCTGCAGCTG 
GCGCGTGCGC GCCGCAAGGT GCTGGTGATT GATGCCGGGC AGCGGCGCAA CCGTTTCGCC
AGCTATTCAC ACGGCTTCCT TGGCCAGGAC GGGGTGGACC CGGCCCGCAT CTGGGCCGAG
GCGTGCCGGC AGCTGCTGGC CTATCCGACG GTGACCTGGG TTGAGGGCTC GGCCAGCACC
ATCGCCGGCG GCAAGGACGA ATTCCGTGTT TCCACGGCAG CCGGCGACAC ATTCGCGGGC
CGCCGCATCC TGCTGGCCAC AGGCGTCGCC GACCGGCTTC CCGACATTCC GGGTCTCGCC
GACCGCTGGG GCCGGACGGT GTTCCACTGC CCCTATTGCC ACGGTTACGA GCTGGACCAG
GGCCGGATCG GGGTCATCGC CACCGGCGCG ATGTCGCTTC ATCAGGCGCA GCTGCTGCCG
GAATGGGGCG AGGTCACCTT CCTGACCAAC GGCGCCCTGA CACTGGAGCC GGAGCAGCGC
GACGACTTGC GCAGCCGCGG CGTTGCCATT GAGGAAACCC CCGTCGCCCG GATCGCGGGC
GAGGCCGAGG TGGAACTGCG CGACGGCCGG GTGCTGCCCT TCGCCGGTCT GTTCACCGCG
ACCGGGACCG AGCCGGCCAG CCCGCTGGCC GAGGCCGCCG GCTGCGAGTT GATCGAGACG
CCGATGGGCC GCCAGATCGT GACGGATGAG ACGAAGGAAA CCAGCCTTCC CGGCATCTTT
GCCTGCGGCG ACGTCGCGCG GGCACCGCAT TCGGTGTCAC TGGCGGTGGG GGACGGGGCA
TGGGCCGGGG CGCAACTGCA CCGCTCGCTG GTCTGGCCGG AATGA
 
Protein sequence
MQDVIVIGGS YAGMAAALQL ARARRKVLVI DAGQRRNRFA SYSHGFLGQD GVDPARIWAE 
ACRQLLAYPT VTWVEGSAST IAGGKDEFRV STAAGDTFAG RRILLATGVA DRLPDIPGLA
DRWGRTVFHC PYCHGYELDQ GRIGVIATGA MSLHQAQLLP EWGEVTFLTN GALTLEPEQR
DDLRSRGVAI EETPVARIAG EAEVELRDGR VLPFAGLFTA TGTEPASPLA EAAGCELIET
PMGRQIVTDE TKETSLPGIF ACGDVARAPH SVSLAVGDGA WAGAQLHRSL VWPE