Gene Pden_3118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3118 
Symbol 
ID4581682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp302450 
End bp303199 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content67% 
IMG OID639770442 
Productmethionine aminopeptidase 
Protein accessionYP_916895 
Protein GI119385840 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCA CCAATCAGGA CGAACTCGAC GGGTTGAAGG AGATCGGCCG GATCGTCGCC 
AACACCATGC AGGCCATGGC GAAGGCGATG GAACCCGGCA TGACCACGCG CGAACTGGAC
GAAATCGGCC GCGCGCTGCT GGAGCGCGAG GGCGCCCTTT CGGCGCCGCA ATCCACCTAT
GATTTCCCCG GCGCGACCTG CATCAGCGTC AACGAGGAAA TCGCCCATGG CATCCCCGGC
GACAGGGTGA TCGCGGCGGA CGATCTGGTG AATATCGACG TGTCGGCCTC GAAGAACGGC
TATTTCGCCG ATACCGGCGC CACATATCGC GTCGCGCCCG TGCGCCCCTC GCTGGATCGG
CTGTGCCGCG ATGGCAGGCA GGCGATGCAG ATCGGTATTG CCCAGGTCGG CAGCGGCCGC
CCGCTTGCGG GCATCGGTCG CGCCATCGGC AAGTTTGCAG AGCGGCGCGG CTATACGCTG
ATCCGCAACC TTGCCAGCCA TGGCATCGGC CGGGCGCTGC ACGAGGAGCC CGCGGAAATC
CCGACCTGGC CCGCGCGCGG CGAAAAACGC CGTATCCACA GGGGGCTTGT ACTGACGGTC
GAACCGTTCT TGTCCAGAGG CGGCCTCTGG GCGACGGAGG CGGACGACGG CTGGACGCTT
TACAGCGAAC CGCGCGCCCC GGTGGTGCAA TACGAGCATA CGGTCGTCGC GACGGATCGC
GGTGCCATGG TGGTCACGCT GCCGGGCTGA
 
Protein sequence
MTITNQDELD GLKEIGRIVA NTMQAMAKAM EPGMTTRELD EIGRALLERE GALSAPQSTY 
DFPGATCISV NEEIAHGIPG DRVIAADDLV NIDVSASKNG YFADTGATYR VAPVRPSLDR
LCRDGRQAMQ IGIAQVGSGR PLAGIGRAIG KFAERRGYTL IRNLASHGIG RALHEEPAEI
PTWPARGEKR RIHRGLVLTV EPFLSRGGLW ATEADDGWTL YSEPRAPVVQ YEHTVVATDR
GAMVVTLPG