Gene Pden_3115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3115 
Symbol 
ID4581679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp298541 
End bp299911 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content61% 
IMG OID639770439 
Producthypothetical protein 
Protein accessionYP_916892 
Protein GI119385837 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAAC CGCTCTTACT TCTGCTTGCT GGCCTGCTCG TAATCCTCGT TATCATCGCA 
GCCGGCGCCT ACTTCGTTGC CCAGGAATTT GCCTATATGG CGGTTGACCG CACCCGTCTC
GCCGCGCAGG CCGCAAGTGG CGATTTGGCT GCAAAGCGCG CCCTTGCCGT CACGAAGCGC
ACCAGCTTCA TGCTCTCGGG CGCTCAGCTC GGCATCACGG TGACGGGGCT GATGGTCGGC
TATGTCGCCG AGCCCTTGGT CGGCAAATCC CTGGGCATGC TGCTGGGCGG TGTTGGCATT
CCCGAATCGA TAGGGATCAG CGTTGGGACG ATCCTTGCGT TGCTCTTCGC CACCATCGTC
CAGATGATCT TTGGCGAACT TTACCCCAAG AACCTGGCCA TTGCGAATTC AGAACCTATG
GCCAAGGCAC TGGCGGCCTC GACGACGACC TATCTGTCGC TCTTCGGCTG GCTGATCACC
TTCTTCGACA AGGCGGCAAA CCTGTTCCTG CGGCTTTTAC GGATCGAGCC AGTGCATGAC
CTCGACGTCA GCGCCTCGGC CAAGGACCTG CCCCATATCA TCGCGGACTC CCGCGAAAGC
GGCGATCTTC CGGTCGAGCT GTCGCTCATG ATGGACCGGA TCCTAGACTT CCCCCACCGG
GATGCCGAAC ATGCGATGGT CCCGCGAGCG CAGGCGGACT GGGTCGACCC CGATACCACC
ATCGCGGAAC TGCGCGAGAT GATGGCGCAT GGCCACACGC GCTATCCGGT CATTGACGAT
GATGACGTGC CGGTTGGCGT CGTGCATCTG GCCGATATTC TTCCAAAGGT GAATGCCGAG
CAACTGGAAG CCACGGCGGC CACGGTGATG CGGCCGGTCG CTATTGTGCC GACGCTGATG
CCGCTGCCGG CGGCGCTTGA GACACTGGTC AAATCCGGCA ACAAGATGGT TTGCGTCATC
GACGAATACG GTGGATTTTC CGGCGTCCTC ACCATCGAGG ACATCGCCAT GGAGGTCGTG
GGCGAGATCA CCGACGAATT CGACAAAAAC GCCATCCAGC CGCTACGCGA AGAGGACGAG
GGCGTCTGGG TGATGGAAGG CGATGTTCAC CTCGACGAGG TGGAGCGCGC GGTGAACCAC
GATCTGCCCC GCGGCGATTT CGAGACGATC TCGGGCCTGC TCATCGCGCA GTTGGGGCGC
CTGCCCACCA AGGCCGACAC GATCCTCGTT GATCTGCCGG CCGACGGTGC CGATGTGGTA
TCGGATGCCC CCCTGCGTCG CCGCCTTGAG GTGAATGTTC TGCGCATCGC GCGCCATGTG
CCAACCCTTG TGCGCGTCAA ACTCGTGGAT GAGCAGGAGC AAGACCAATG A
 
Protein sequence
MLEPLLLLLA GLLVILVIIA AGAYFVAQEF AYMAVDRTRL AAQAASGDLA AKRALAVTKR 
TSFMLSGAQL GITVTGLMVG YVAEPLVGKS LGMLLGGVGI PESIGISVGT ILALLFATIV
QMIFGELYPK NLAIANSEPM AKALAASTTT YLSLFGWLIT FFDKAANLFL RLLRIEPVHD
LDVSASAKDL PHIIADSRES GDLPVELSLM MDRILDFPHR DAEHAMVPRA QADWVDPDTT
IAELREMMAH GHTRYPVIDD DDVPVGVVHL ADILPKVNAE QLEATAATVM RPVAIVPTLM
PLPAALETLV KSGNKMVCVI DEYGGFSGVL TIEDIAMEVV GEITDEFDKN AIQPLREEDE
GVWVMEGDVH LDEVERAVNH DLPRGDFETI SGLLIAQLGR LPTKADTILV DLPADGADVV
SDAPLRRRLE VNVLRIARHV PTLVRVKLVD EQEQDQ