| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3111 |
|---|
| Symbol | |
|---|
| ID | 4581675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 294654 |
|---|
| End bp | 295790 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639770435 |
|---|
| Product | hydrogenase expression/formation protein HypD |
|---|
| Protein accession | YP_916888 |
|---|
| Protein GI | 119385833 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0409] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCG CTTCGGAATT CCGCGATCCC AAGGCGGCGC GCGCGCTGCT GGCCGCGATT
GCCCGCCGCG CCGAGCAGAT CGGCGCCAGC CGCGAAAAGC CGGTGCATAT CATGGAGATC
TGCGGCGGCC ACACCCATTC GATCTTTCGC TATGGTCTGG ACAAACTGGT GCATGAGGGC
GTGGAATTCA TCCACGGCCC CGGCTGTCCG GTTTGCGTTC TGCCGCGTGC GCGGATCGAT
GAATCCATCC AGATTGCCAG GCGTCCGGGC GTCATCTTCA CCACCTTTGG CGATGCGATG
AGGGTGCCGG GCCGGTCGCA ATCGCTGTTG CAGGCGCGGG CGGCGGGGGC GGATATCCGC
ATGGTCTATT CGCCGCTGGA TGCCCTGGCT CTGGCCCGGA AATACCCCGA ACGCGACGTG
GTGTTCTTTG GTCTGGGCTT CGAGACGACG ACCCCTTCGA CCGCGCTGGC CATCCAGCAG
GCCGCGCGGG AAGGGTTGGG CAATTTCAGC GTCTTCTGCA ACCATATCAC CGTGCCCGAA
CCCATCCACG CCCTGCTGAA GGATCCGCAT ATGGTGCTGG ACGGGTTCAT CGGGCCGGGT
CATGTCTCGA TGGTCATCGG CGTGCATCCC TATGATTTCA TTGCCCGGGA CTTCCAGAAA
CCGCTTGTCG TCGCAGGTTT CGAGCCGACC GATCTTCTGC AATCGGTGCT GATTGTGCTG
GACCAGATCG CCGAGGGGCG CGCCGAGGTC GAAAACCAAT ATGCCCGCGT GGTCCCCGAG
GAGGGCAATC CGGTTAGTCT GGCCGCCATT GCCGATGTCT ATGAACGGCG CCCCAGCTTT
GAATGGCGCG GTCTGGGCGA GATCGACGCC AGCGGATTGC GCATCCGCCC GAAATACGCA
GCCTTCGACG CCGAGGAAAA ATTCGGCATC GGCTATGCGG TGGCGCGCAA TCCCGCACCC
GAACCCGAGG GCTGTGCCTG TGGCGCCGTC ATGACGGGGC GGGTCAAACC TACGGCCTGC
CCGCATTTCG GCAAGGGCTG CACGCCAGAG ATGCCGCTGG GGGCGCTGAT GGTCAGTTCG
GAAGGGGCCT GTGCGGCCTA TTGGCAATAT GGCGGTGCGC GGGTTGCAGC GGAATAG
|
|---|
| Protein sequence | MKFASEFRDP KAARALLAAI ARRAEQIGAS REKPVHIMEI CGGHTHSIFR YGLDKLVHEG
VEFIHGPGCP VCVLPRARID ESIQIARRPG VIFTTFGDAM RVPGRSQSLL QARAAGADIR
MVYSPLDALA LARKYPERDV VFFGLGFETT TPSTALAIQQ AAREGLGNFS VFCNHITVPE
PIHALLKDPH MVLDGFIGPG HVSMVIGVHP YDFIARDFQK PLVVAGFEPT DLLQSVLIVL
DQIAEGRAEV ENQYARVVPE EGNPVSLAAI ADVYERRPSF EWRGLGEIDA SGLRIRPKYA
AFDAEEKFGI GYAVARNPAP EPEGCACGAV MTGRVKPTAC PHFGKGCTPE MPLGALMVSS
EGACAAYWQY GGARVAAE
|
|---|
| |