| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3098 |
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| Symbol | |
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| ID | 4581662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 284286 |
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| End bp | 286079 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639770422 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_916875 |
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| Protein GI | 119385820 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCA ACACGCCGAA TGGCTATACC CTCGACAATT CCGGGCGCCG CATCGTGGTG
GACCCGGTCA CCCGGATCGA AGGGCATATG CGCTGCGAGG TCAACGTGGA TGATCAGGGT
GTCATCCGCA ACGCGGTCTC GACCGGGACG ATGTGGCGCG GGCTGGAGGT CATCCTGAAA
GGGCGCGACC CGCGCGACGC CTGGGCCTTT GTCGAGCGGA TCTGCGGCGT CTGCACTGGC
ACGCATGCGC TGACCTCGGT GCGCGCGGTC GAGGATGCGC TTGGGATCAT GATCCCCGAC
AATGCCAACT CGATCCGCAA CATGATGCAG CTGGCGCTGG AGATCCACGA TCATATCGTG
CATTTCTATC ACCTGCATGC GCTGGACTGG GTGAATCCGG TCAATGCCCT GCGCGCCGAC
CCCAAGGCGA CCAGCGAATT GCAGCAGATG GTCTCGCCCT CGCATCCGAT GTCATCGCCG
GGCTATTTCC GCGATGTGCA GAACCGGCTG AAGAAATTCG TCGAATCCGG GCAACTGGGG
CTGTTCAAGA ACGGCTATTG GGACAATCCG GCCTATCTTC TGCCGCCCGA AGCCGATCTG
ATGGCGACGA CTCACTATCT GGAGGCGCTT GATCTGCAAA AGGAAATCGT CAAGGTCCAT
ACGATCTTTG GCGGCAAGAA CCCGCATCCG AACTGGCTGG TGGGCGGGGT GCCATGCCCG
ATCAATATCG ACGGCACCGG ATCTGTCGGC GCGATCAATA TGGAGCGGCT GAACCTCGTC
TCCTCGATCA TTGATCTGTG CGACGAGTTC AACAAGAACG TCTATATTCC CGATGTGATC
GCCATCGGCG GCTTTTACAA AAGCTGGCTT TACGGGGGCG GGCTGTCGTC GCAGGCGGTC
ATGGCCTATG GCGACATTCC CGAGAACCCG AATGACTTTT CGCCCGAGCA ACTGCATTTG
CCGCGCGGCG CGATCATCAA CGGCAATCTC AACGAGGTGC ATGACGTCGA TCCGCGCGAC
CCCGAGCAGG TGCAGGAATT CGTCGACCAT TCCTGGTATT CGTATGGCGA TCCGGGCCGC
GGCCTGCATC CCTGGGATGG TGAAACCAAT CCGAAATTCG AGCTGGGGCC GAACCACAAG
GGCACGAAAA CTCGCATCGA ACAGCTGGAT GAATCCGCGA AATATTCCTG GATCAAGGCG
CCGCGCTGGC GAGGTCACGC GATGGAGGTC GGCCCGCTTG CGCGCTATAT CATCGGCTAC
GCCAAGGGGC ATGAGGACAT CAAAAATCAG GTCGATGGCC TGTTGAGAAC CATGGATTTG
CCCTTCGAGG CGCTGTTCTC GACTCTGGGC CGCACGGCGG CGCGGGCGCT GGAATCGGAA
TATTGCGGGC GCCTGCAACG GCATTTCTTC GACAAGATGG TGCGGAACAT CAAGAATGGC
GATCAAAGCA CCGCCAATGT CGAGAAATGG GATCCTTCGA CCTGGCCGAA AGAGGCCAAG
GGCGTCGGCA TGACCGAGGC ACCGCGCGGC GCGCTTGGCC ATTGGATCCG CATCAAGGAC
GGCCGGATCG AGAATTACCA ATGCGTGGTG CCGACCACCT GGAATGGCTC GCCCCGCGAC
AGCCAGGGCA ATATCGGTGC CTTCGAGGCC AGCCTGATGA ACACGCCCAT GGAGCGCCCG
GATGAGCCGG TCGAAATCCT GCGCACGCTG CACAGTTTCG ACCCCTGCCT GGCCTGCTCT
ACCCATGTCA TGTCACCGGA TGGTGACGAG CTTGCCGCCG TCAAAATTCG CTGA
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| Protein sequence | MTINTPNGYT LDNSGRRIVV DPVTRIEGHM RCEVNVDDQG VIRNAVSTGT MWRGLEVILK
GRDPRDAWAF VERICGVCTG THALTSVRAV EDALGIMIPD NANSIRNMMQ LALEIHDHIV
HFYHLHALDW VNPVNALRAD PKATSELQQM VSPSHPMSSP GYFRDVQNRL KKFVESGQLG
LFKNGYWDNP AYLLPPEADL MATTHYLEAL DLQKEIVKVH TIFGGKNPHP NWLVGGVPCP
INIDGTGSVG AINMERLNLV SSIIDLCDEF NKNVYIPDVI AIGGFYKSWL YGGGLSSQAV
MAYGDIPENP NDFSPEQLHL PRGAIINGNL NEVHDVDPRD PEQVQEFVDH SWYSYGDPGR
GLHPWDGETN PKFELGPNHK GTKTRIEQLD ESAKYSWIKA PRWRGHAMEV GPLARYIIGY
AKGHEDIKNQ VDGLLRTMDL PFEALFSTLG RTAARALESE YCGRLQRHFF DKMVRNIKNG
DQSTANVEKW DPSTWPKEAK GVGMTEAPRG ALGHWIRIKD GRIENYQCVV PTTWNGSPRD
SQGNIGAFEA SLMNTPMERP DEPVEILRTL HSFDPCLACS THVMSPDGDE LAAVKIR
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