| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3097 |
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| Symbol | |
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| ID | 4581661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 283197 |
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| End bp | 284282 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639770421 |
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| Product | hydrogenase (NiFe) small subunit HydA |
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| Protein accession | YP_916874 |
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| Protein GI | 119385819 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGTCGCAAA TCGAGACTTT CTACGATGTT ATGCGCCGGC AGGGGATCAC CCGCCGCAGT
TTCATGAAAT ACTGCTCGCT GACAGCAGCG GCGCTTGGCC TTGGCCCGGC TTTCGTGCCC
AAAATCGCCC ATGCGATGGA AACCAAGCCC CGCACGCCGG TGATCTGGGT GCATGGTCTG
GAATGCACCT GCTGCTCGGA AAGCTTCATC CGCTCGGCCC ATCCGCTGGC CAAGGATGTC
GTGCTGTCGA TGATCAGCCT TGACTATGAC GATACGCTGA TGGCCGCTGC CGGCCATGCC
GCCGAGGCGG CCTTCAAGGA CACCATCCAG AAATACAAGG GCCAGTATAT CCTTGCCGTC
GAGGGAAACC CGCCGTTGAA CGAAGACGGG ATGTATTGCA TCACCGGCGG CAAGCCATTT
GTCGAAAAGC TGCGCCATGC GGCCAGGGAC GCCAAGGCGA TCATTTCATG GGGGGCTTGC
GCGTCCTATG GCTGCGTCCA GGCGGCCGCG CCGAACCCGA CGCGGGCGAC GCCGGTCCAC
AAGGTCATCC TCGACAAGCC GATCATCAAG GTGCCGGGCT GCCCGCCCAT CGCCGAGGTG
ATGACCGGCG TCATCACCTA TATGCTGACC TTCGACCGCA TGCCCGAGCT TGATCGTCAG
GGCCGGCCGA AGATGTTCTA CAGCCAGCGC ATCCACGACA AATGCTATCG CCGCCCGCAT
TTCGACGCCG GCCAGTTTGT CGAGCATTGG GACGACGAAA ACGCCAAGAA GGGCTATTGC
CTTTACAAGA TGGGCTGCAA GGGCCCGACC ACCTATAACG CCTGCTCGAC CGTGCGCTGG
AACGAGGGCG TTTCGTTTCC GATCCAGTCG GGCCATGGCT GCATCGGCTG TTCCGAAGAC
GGGTTCTGGG ATCAGGGTTC GTTCTATGAC CGGCTGACCA ATATCAAGGC CTTCGGGGTC
GAGGCCAATG CCGACAAGCT GGGCGGCATC GCGGCGGGTG CAGTCGGTGG GGCCGTCGCG
GTCCATGCCG CGATTTCGGC GCTGAAACGG GCGCAGAAGA AGACCCAGGA CAAGGTGGAG
GCCTAG
|
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| Protein sequence | MSQIETFYDV MRRQGITRRS FMKYCSLTAA ALGLGPAFVP KIAHAMETKP RTPVIWVHGL
ECTCCSESFI RSAHPLAKDV VLSMISLDYD DTLMAAAGHA AEAAFKDTIQ KYKGQYILAV
EGNPPLNEDG MYCITGGKPF VEKLRHAARD AKAIISWGAC ASYGCVQAAA PNPTRATPVH
KVILDKPIIK VPGCPPIAEV MTGVITYMLT FDRMPELDRQ GRPKMFYSQR IHDKCYRRPH
FDAGQFVEHW DDENAKKGYC LYKMGCKGPT TYNACSTVRW NEGVSFPIQS GHGCIGCSED
GFWDQGSFYD RLTNIKAFGV EANADKLGGI AAGAVGGAVA VHAAISALKR AQKKTQDKVE
A
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