| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3093 |
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| Symbol | |
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| ID | 4581657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 276953 |
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| End bp | 278287 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639770417 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_916870 |
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| Protein GI | 119385815 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGGG CAATGGACGC AAAGGACGAC AGGGCGGGTG CTGCGCTGAC GGATGCGGCC
TGGTCCGATG TGCTGATTGC GGTGGATCGC ACCTATGCCG AGCTGATCGA ACATCAGGAG
CGGCTTGAGG CCCAGAACCG CGAGCTTGAG GCGCTGCGTC AGTTCCTGTC CTCGGTCATC
ACCTCGGTTT CCGATGTGCT GATCGTGCTG GATCGCGACG GGCGGGTGGA TGAGGTCAAT
GCCTCGACCT GTGTCTGCAC CGGGCTGCCT GTCGCGGCCC TGGTCGGCCG GAGCGTGGCG
GATCTGGTGC GCGAAGAGGA TCGCGCGGGT CTTTCGGCCC TGATTGCGGA GATTGCGCGC
ACGCGGGCGC CGGGGCGGAT GGAGCTTTCG CTTGTGAGTT CGCGTGAGCC GGCCCCGGTC
GAGGCGGTCC TGTCGCCGCG CCTCGATGAT CGCGGCCGGA TCGAGGGGCT GGTGCTGACG
GGGCGTCCGG TGGGGGAATT GCGCCGCGCC TATGCCCAGC TTGAACGCAG CCATGCCGAG
ATGAAGGCCG CTCAGGCGCA GCTGGTCCAT GGCGAGAAGC TGGCCTCATT GGGGCGTTTG
CTGGCCGGGG TGGCGCATGA GCTGAACAAT CCGATCAGCT TTGTCTATGC CAATGCCCAT
GCGCTGGAAC GCTATGCCGC CAAGTTTGAG ACCTATTTCG AGCGGGTTCA GGCCGGGGCA
GACAGGGATG AACTGGTCCG CCTGCGGGAG GAATTGCGGC TGGACCGCGA GTTGCGCAAC
CTGCGCGAGG CGGTGCAGGG CGCCCGCGAG GGGGCCGAAA GAGTGCGCGA TATCGTCGAG
GATCTGCGCC GCCTGTCCTC GGACGGGGGC GGAGAGATGG CGGCCTTCGA CCTGGTCGAG
ATCGCCCGCA CCGCCGCCTT CTGGATCATG CGCGGGGCCG GCCACAGCAC CGTGCCCGAG
ATCCATGCCG AAGGGCCGGT GATGGTTCTG GGGCATACGG GCCATATTCA GCAGGTGGTG
ATGAATCTGG TGCAGAACGC GCTGGATGCG GTTTCGGAAA CCGCAGCCCC GCAGATCGCC
TTGCGGATCA TGCGCGAGGA AGGCCGTGGC GTGCTGGACA TCCACGACAA CGGTCCGGGC
ATCGACGAGG CGACGGCCGC GATGATCTTT GACCCGTTCT TCACCACGAA ACCCGTGGGG
AAAGGCACCG GGCTTGGCCT GTCGATCAGC CTCAAGATCG CCGAGGATCA TGGCGGCAGG
CTGAGTTACA GCCCCGCCTC CGGTGGTGGC GCGCTGTTTC GGCTGGAACT GCCGCTGGCA
GGAGATGGCG CATGA
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| Protein sequence | MPRAMDAKDD RAGAALTDAA WSDVLIAVDR TYAELIEHQE RLEAQNRELE ALRQFLSSVI
TSVSDVLIVL DRDGRVDEVN ASTCVCTGLP VAALVGRSVA DLVREEDRAG LSALIAEIAR
TRAPGRMELS LVSSREPAPV EAVLSPRLDD RGRIEGLVLT GRPVGELRRA YAQLERSHAE
MKAAQAQLVH GEKLASLGRL LAGVAHELNN PISFVYANAH ALERYAAKFE TYFERVQAGA
DRDELVRLRE ELRLDRELRN LREAVQGARE GAERVRDIVE DLRRLSSDGG GEMAAFDLVE
IARTAAFWIM RGAGHSTVPE IHAEGPVMVL GHTGHIQQVV MNLVQNALDA VSETAAPQIA
LRIMREEGRG VLDIHDNGPG IDEATAAMIF DPFFTTKPVG KGTGLGLSIS LKIAEDHGGR
LSYSPASGGG ALFRLELPLA GDGA
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