| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3089 |
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| Symbol | |
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| ID | 4581653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 271811 |
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| End bp | 272704 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639770413 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_916866 |
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| Protein GI | 119385811 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.830597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTG AGAGCCGGCA AAACTCATCA GATTGCTTGC CTCCCCGAGC GATTGATATT
TTTCCCCCGC AATGGGGTCG GAAATATTAT AGCCCATACG TTGACCTAAT GCTAACACAA
ACAAGGGAAG GCAAGATAGA GTTTGCCGCC AGCTCGAATT TCATCCTCGT CCTCCTGACG
CCGCAGGCAC GGAGGAAAAC CATGCTGAGC TCATCTCGCC GTCAGGAATA TTCCGCATCT
CCGGGCACGG TGGAATTGGT GCCAGCCGGA GAAAACTACA CAGCAGAATG GTCGGAGCCG
AAAGAGAACA TACTTCTTTC TGTCACGCCT GAGAAATTGA ACAACCTGAG CATCAGGGAA
TACGATCTTG AATTATCAGA TCCCCCATTG TTCAAGGTTG GAGATGTGGA TCCAATTGCA
CACAAAATAG CCATGTTGCT AAGGAATGGA ATCATCAATG ACGGGGATAA TCATCTTTAC
CTGGAGTCCC TCAGCATGGC ATTGCTTTCC CACCTCATCA GACGAATGAC CAATGCCGAC
AACCGAGTGG ATCACAACCC GAAGCGAGGC GGACTGGCAT CACATATTCG GCGCAGGGTT
GTCGAGCATA TACACGAAAA CATCCATCGC AGGATAACGA TCAGTGAACT TTCCGACATA
TCCGGTATGT CTTGCGGGCA TTTTTCGCGT AGTTTCGGCG TGGAGATGGG TGTGTCCCCG
CATCAATACG TTATGAAACT GAGGGCCGAG CGTGCAATGT CATCTATTGC CAATACAGAT
TCGCACATCT CGCAGATAGC GAACGCGCAT GGCTTCTCTA GCCAGTCTCA CATGATGGTT
GTCATGAAGA AATTTTTCGG CACAACACCG GGAGAGTTGA GGCGGAAGCG ATAA
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| Protein sequence | MKIESRQNSS DCLPPRAIDI FPPQWGRKYY SPYVDLMLTQ TREGKIEFAA SSNFILVLLT
PQARRKTMLS SSRRQEYSAS PGTVELVPAG ENYTAEWSEP KENILLSVTP EKLNNLSIRE
YDLELSDPPL FKVGDVDPIA HKIAMLLRNG IINDGDNHLY LESLSMALLS HLIRRMTNAD
NRVDHNPKRG GLASHIRRRV VEHIHENIHR RITISELSDI SGMSCGHFSR SFGVEMGVSP
HQYVMKLRAE RAMSSIANTD SHISQIANAH GFSSQSHMMV VMKKFFGTTP GELRRKR
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