Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3083 |
Symbol | |
ID | 4581647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 267354 |
End bp | 267965 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639770407 |
Product | putative outer membrane protein |
Protein accession | YP_916860 |
Protein GI | 119385805 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.186031 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAC GACTTGGTGT CATGTCGATT GCAGCGCTGG CCATTGGCGG CGCGGCAAAT GCTGGTTCGT ATACGGCTCC GGTCATTGAA GCGCCCGTGA TCGCGCCCGC GGCGCCTGCG CTGAGCCACA GCAACACCTG GACCGGTTTC TATGCCGGTA TGCAGATGAG CTATTCGGAT TTCTCGGTAA ATCGCGACGG CGTCGATGAC GCGACCGGCG GCGTCTACGG GATCCATGCC GGCTATAACC ACCAGCTTCA CAACAACATG GTCATCGGTG GAGAGATTAC CTTCGATCAC TCCAGCGCCG ACAATGATGT CTGGCAGGTC GAACGTCTGA TGACGGTTCG CGCCAAGGTG GGGTATGCCC ATAATAATTG GCTGGTCTAT GGCTTGGCAG GCTATGCGCA TGTCCGGACC GAGGGCGCCG ACCGTGCCCA TGGAAAAAGC GGCGGTGCAG TTTTCGGCAT CGGCGCCGAT TATGCCGTAT CCGACAAGTG GCTGGTCGGC GGGTCCTGGG AAGGCTATCG TTTCAGTGAC TTCAAGAACG ATCCCGACAA CATGGAAGTT GATGGCGGGT CCGTTCGGTT CCGCGTGTCC TACCGATTCT GA
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Protein sequence | MMKRLGVMSI AALAIGGAAN AGSYTAPVIE APVIAPAAPA LSHSNTWTGF YAGMQMSYSD FSVNRDGVDD ATGGVYGIHA GYNHQLHNNM VIGGEITFDH SSADNDVWQV ERLMTVRAKV GYAHNNWLVY GLAGYAHVRT EGADRAHGKS GGAVFGIGAD YAVSDKWLVG GSWEGYRFSD FKNDPDNMEV DGGSVRFRVS YRF
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