Gene Pden_3083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3083 
Symbol 
ID4581647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp267354 
End bp267965 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content58% 
IMG OID639770407 
Productputative outer membrane protein 
Protein accessionYP_916860 
Protein GI119385805 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.186031 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAC GACTTGGTGT CATGTCGATT GCAGCGCTGG CCATTGGCGG CGCGGCAAAT 
GCTGGTTCGT ATACGGCTCC GGTCATTGAA GCGCCCGTGA TCGCGCCCGC GGCGCCTGCG
CTGAGCCACA GCAACACCTG GACCGGTTTC TATGCCGGTA TGCAGATGAG CTATTCGGAT
TTCTCGGTAA ATCGCGACGG CGTCGATGAC GCGACCGGCG GCGTCTACGG GATCCATGCC
GGCTATAACC ACCAGCTTCA CAACAACATG GTCATCGGTG GAGAGATTAC CTTCGATCAC
TCCAGCGCCG ACAATGATGT CTGGCAGGTC GAACGTCTGA TGACGGTTCG CGCCAAGGTG
GGGTATGCCC ATAATAATTG GCTGGTCTAT GGCTTGGCAG GCTATGCGCA TGTCCGGACC
GAGGGCGCCG ACCGTGCCCA TGGAAAAAGC GGCGGTGCAG TTTTCGGCAT CGGCGCCGAT
TATGCCGTAT CCGACAAGTG GCTGGTCGGC GGGTCCTGGG AAGGCTATCG TTTCAGTGAC
TTCAAGAACG ATCCCGACAA CATGGAAGTT GATGGCGGGT CCGTTCGGTT CCGCGTGTCC
TACCGATTCT GA
 
Protein sequence
MMKRLGVMSI AALAIGGAAN AGSYTAPVIE APVIAPAAPA LSHSNTWTGF YAGMQMSYSD 
FSVNRDGVDD ATGGVYGIHA GYNHQLHNNM VIGGEITFDH SSADNDVWQV ERLMTVRAKV
GYAHNNWLVY GLAGYAHVRT EGADRAHGKS GGAVFGIGAD YAVSDKWLVG GSWEGYRFSD
FKNDPDNMEV DGGSVRFRVS YRF