Gene Pden_3078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3078 
Symbol 
ID4581642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp259693 
End bp260769 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content67% 
IMG OID639770402 
Producthypothetical protein 
Protein accessionYP_916855 
Protein GI119385800 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.183188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACG CCACCACCCA TCTCCTGCTG CCCTACATTC TGGCGGCGCA GGCCCAGAAG 
CATGTCACCC ACAACGAGGC GCTGCGGCTG CTCGACGGGC TCGTGCAGCT CTCGGTTCTA
GACCGGGATC TGACCGCGCC TCCCGGCAGC CCCGCCGACG GTGACCGCTA CATTGTGGCG
TCGGGCGCCA TCGGGGCGTG GACAGGCTGG GACCTGAACG TCGCGCTCTG GACCGACGGG
GCCTGGCTTC GCCTTCCGCC ACGGACCGGC TGGCGGGCGT GGGTCGAGGA CGAGGGGCTG
CTGCTGGTCT ACGACGGCGC AGGCTGGGTC GGGACCACTC CCGCTGCGCT GCAGAACCTT
GCGTTGCTGG GGCTGGGCAC CACGGCCGAC CCGGCCAATC CGTTCTCGGC CAAGCTCAAC
GCCGCGCTCT GGACCGCGAA GACTGTCGCG GAAGGCGGCA CGGGCGATCT CTTCTACACC
ATGAACAAGG AAGCCGCCGG TCGCGACCTC GGGCTTACCT TCCAGACCGG CTATGTCACC
AAGGCGCTGA TGGGCCTGTT CGGTTCGGAC AGGTTCCGGC TCGCGGTCTC CGCCGACGGC
AGCACCTTCT TCGATGGGCT GATCGTCGAC AACGCGACCG GCATCGTCGA CCAGCCCCGG
CTGCCGCGCT TCAAGGGCCA TACCAACTAC GACAACTATG TCGCCGTCGA CACCTGGACG
AAGATCGGCA TCAACAACAC CGACTATAAC GACCAGAGCG CGTTCGACGC CGGCAACAAC
CATTTCGTTG CGCCCGCCGC AGGCACCTAC CTCTTCGGCG CCACGCTGCT CTACAAGGTC
AACGCCAGCA CCAATGCGCG CATGCGCGGG CGGCTGGTGC TGAACGGCTC GACGGAGATC
TGGGGATCGC GGGGCGAGGT TTCCGGGGCG CACGCCTCCG AGGCGACGGC GCTCTGGCTG
CAGACCATGG TCCCGCTCGC GCAAGGCGAC ACGGTCGAAC TGCAGGGCAC CTTCCGCGCG
GCGGACGGGT ATTTCGCTGC CGATCACACG AGCTTTTGGG GCGCGAAGAT CGGCTGA
 
Protein sequence
MSDATTHLLL PYILAAQAQK HVTHNEALRL LDGLVQLSVL DRDLTAPPGS PADGDRYIVA 
SGAIGAWTGW DLNVALWTDG AWLRLPPRTG WRAWVEDEGL LLVYDGAGWV GTTPAALQNL
ALLGLGTTAD PANPFSAKLN AALWTAKTVA EGGTGDLFYT MNKEAAGRDL GLTFQTGYVT
KALMGLFGSD RFRLAVSADG STFFDGLIVD NATGIVDQPR LPRFKGHTNY DNYVAVDTWT
KIGINNTDYN DQSAFDAGNN HFVAPAAGTY LFGATLLYKV NASTNARMRG RLVLNGSTEI
WGSRGEVSGA HASEATALWL QTMVPLAQGD TVELQGTFRA ADGYFAADHT SFWGAKIG