Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3077 |
Symbol | |
ID | 4581641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 256692 |
End bp | 259682 |
Gene Length | 2991 bp |
Protein Length | 996 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639770401 |
Product | gene transfer agent (GTA) like protein |
Protein accession | YP_916854 |
Protein GI | 119385799 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.759421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.242623 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCGCG ACGATCAGGA CCGCCCGGTC TATGGCGGTA CACCCTCCGA CTTCGCCGTG GTGCAGGCGA TCCAGGAGAT GAAGGCGCGC AGGCTGCGGG TAACCTTCTA TCCCTTCATC CTGATGGACG TTCCGCCCGG CAACACCCTG CCGAACCCCT ATTCCGACAA CGCCGCCGAG ACCGGCCAAC CTGCCTTCCC GTGGCGGGGC CGGATCACCT GTTCTCCGGC TGCGGGGTTC GCGGGGAGCG TCGACAAGAC CCCGACGGCG GCGACGCAGG TCGCGGCGCT ATTCGGCGGG GCTACACCCG CGAACTTCTC CGTATCTGGC GAAACCGTCA ACTGGACCGG CCCTGCCGGT GACTGGGGCC TGCGCCGGAT GATCCTGCAC TATGCCCATC TCTGTGCGGC CGCCGGGGGC GTCGATGCCT TCCTGATCGG CTCGGAGATG CGCGGGCTGA CCACCATCCG CTCGGGCGCC AGCAGCTACC CCGCCGTGCA GGCCTTCCGT GATCTGGCGG CAGCCGTGCG CGCCATCCTC GGGCCGGGCA CGAAGATCAG CTACGCGGCC GACTGGTCGG AGTATTTCGG GCACCAGCCA GGCGATGGCA GCGGCGACAT GTTCTTCCAT CTCGATCCGC TCTGGGCCGA TCCCGAGATC GATTTCGTCG GCATCGACAA CTACATGCCA CTGTCCGACT GGCGCGACGG GTTCGAGCAT GCCGACGCCG CCGATGGCTG GCCTGCCATC TACGACCGGG CCTACCTTCA GGCGCACATC GCCGGCGGCG AAGGGTTCGA CTGGTTCTAC TCCTCGGCCG CCGACCGCAC CGCGCAGGTC CGCACCCCGA TTACCGACGG CGCCCACGAC AAGCCATGGG TCTTCCGATA CAAGGATCTG CTCGCCTGGT GGTCTAACCC GCATTACAAC CGCCCGGGTG GGGTCGAGAG CGGCACGCCG ACGGCATGGG TGCCGCAGTC GAAGCCGATC TGGTTCACCG AGCTCGGCTG CCCGGCCATC GACCGCGGCA CCAACCAGCC GAATGTCTTT TTTGATCCGA AGTCGTCAGA GAGCTTCACG CCGTACTTCT CGCGCGGCTG GCGCGACGAC GCCATCCAGC GCGCCTATCT GGAGGCGACG TATCTCTGGT GGGGTCAGGG CGCGAACAAC CCGCTGTCTA CCGTCTACGG AGGCCGGATG GTGCATGTCC CCGAATGCGC CGCCTGGACC TGGGACGCGC GGCCCTATCC CTTCTTCCCG GCACTGACCG GCGTCTGGAC CGATGGTCCG AACTGGCGGC TCGGCCATTG GCTCACCGGG CGGCTGGGCG CGGTCTCGCT CGCGGCCCTC GTCCGGCACC TGTGCCTGCG CGTCGGGTTG CCCGAAAGCC GCATCGACGT CACCGGCCTG TGGGGCGCGG TCGAGGGCTT TGTCATCGGG GCGCTGGAAA GCCCGCGTGC CTCGATCACC ACGCTTGCAC GGCATTTCGG CTTCGATGCC GTCGAGACCG AGGACGTGAT CCGCTTTGTC ATGCGCGGCC GGGCCTCCAT CGCGACCGTC GCGCCCGACG ATCTTGTCGC CACACGCGAG GGCGACGTGC TGGAACTGAC GCGCGGCCAG GAGACCGAGC TGCCGCAGGC GCTGAAATGG CAGCTGGCCC GTGCCGACGA GGATTACGAC GCCGCCCTCG TCGAGGCGCG GCGCATCACG GTGGACACGA CCCGGATCGC CTCGGAATCC TTCCCGATGG CGGTGCCGCC CGAGGAGGCC GAGCGCCGCT GCCGCCGCGC ACTGATGGAG GCGTGGGTGG GGCGCGAGAC GGCGGCGTTC CGCCTGCCGC CCTCGCGGCT TGCGCTCGAT CCCGCCGACG TCATCCGGCT CGCCCATGAC GGGCGGGAGA TCGAGTTCCG TCTCGTCTCC GTCGCGGATG CCGAAGCCCG CGGTATCGAG GCGGTCCGCC AGGACCGGGC GACCTACGAC CTGCCGCCCG GCGATCCCCG CGCGGCGTCG CTGACGCGCG CTGTCGTGTT CGGGGCGCCG GATGCGGTGC TGATGGACCT GCCGCAGCTG ACCGAGGACC AGCCCGCGCA TCGGCCGCTG GTCGGCGCGC ACGCCGTGCC CTGGCCGGGC GAGATGGCGG TGTTCCGCAG TCCTTCGACG GACGGGTTCG AACTGCTGAC CAGCTTCGGC GCGCGAGCCC GCCTCGGCGC GCTGGTCTCG GACTTCTACG CGGGGCCGAC GTCGCGCTTC GACCTCGGCA ACGCTCTGGT CATCGATCTG CTGACCGGCA CGCTGGAGAG CGTCACCGAC CTGACCTTGT TCGGCGGTGC GAACGCGCTC GCCGTCGAGA GCGCACCCGG CGCTTGGGAG ATCGTGCAGG CGGGCGTGGC CGAACTGCTG GCGCCCGGTC GCTACCGCCT GACCCGGCTC CTGCGCGGCC AGCGCGGCAC CGAGGGTGCG ATGGGCAACC CGACCCCGGC CGGTGCCCGC ATGGCGGTGC TGGACGCCTC GTTGAAACCG CTGCCCATCG CCGAGGCCGA TCTCGGCATC CCCTGGAACT GGCGCATCGG CCCGGCGAGC CGCCCGGTCA GCGACGAGAC CTATGTGGCG CAGAGCTTCA CGCCGGTGGG CATGGGGCTG CGGCCGTTCT CGGTCGCCCA TGTCGAGCAG CCATGGCGCA CGCCGCGCAC ACCGGCCGAC CTCACAATCC GCTGGACGCG GCGGTCCCGC GTGCTCTCGG CCGACAACTG GGGCGCGGTC GAAGTGCCGC TCGCCGAGGA AGTTGAAGCT TACCAGGTCG AGATCCTCGA CGGCGCCGCC GTGAAGCGGG TGCTCGGCAC GGGCACCACC AACGCGCTCT ACACCGCCGC CCAGCAGACC GCCGATTGGG GCGCACCGCT CGGCCCCGGC AACACCCTCA CCATTCGCAT CTTCCAGCTC TCCGCCCTCG TCGGGCGGGG CGCGGCGCAG ATCGTCACCC TCACCTTCTG A
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Protein sequence | MNRDDQDRPV YGGTPSDFAV VQAIQEMKAR RLRVTFYPFI LMDVPPGNTL PNPYSDNAAE TGQPAFPWRG RITCSPAAGF AGSVDKTPTA ATQVAALFGG ATPANFSVSG ETVNWTGPAG DWGLRRMILH YAHLCAAAGG VDAFLIGSEM RGLTTIRSGA SSYPAVQAFR DLAAAVRAIL GPGTKISYAA DWSEYFGHQP GDGSGDMFFH LDPLWADPEI DFVGIDNYMP LSDWRDGFEH ADAADGWPAI YDRAYLQAHI AGGEGFDWFY SSAADRTAQV RTPITDGAHD KPWVFRYKDL LAWWSNPHYN RPGGVESGTP TAWVPQSKPI WFTELGCPAI DRGTNQPNVF FDPKSSESFT PYFSRGWRDD AIQRAYLEAT YLWWGQGANN PLSTVYGGRM VHVPECAAWT WDARPYPFFP ALTGVWTDGP NWRLGHWLTG RLGAVSLAAL VRHLCLRVGL PESRIDVTGL WGAVEGFVIG ALESPRASIT TLARHFGFDA VETEDVIRFV MRGRASIATV APDDLVATRE GDVLELTRGQ ETELPQALKW QLARADEDYD AALVEARRIT VDTTRIASES FPMAVPPEEA ERRCRRALME AWVGRETAAF RLPPSRLALD PADVIRLAHD GREIEFRLVS VADAEARGIE AVRQDRATYD LPPGDPRAAS LTRAVVFGAP DAVLMDLPQL TEDQPAHRPL VGAHAVPWPG EMAVFRSPST DGFELLTSFG ARARLGALVS DFYAGPTSRF DLGNALVIDL LTGTLESVTD LTLFGGANAL AVESAPGAWE IVQAGVAELL APGRYRLTRL LRGQRGTEGA MGNPTPAGAR MAVLDASLKP LPIAEADLGI PWNWRIGPAS RPVSDETYVA QSFTPVGMGL RPFSVAHVEQ PWRTPRTPAD LTIRWTRRSR VLSADNWGAV EVPLAEEVEA YQVEILDGAA VKRVLGTGTT NALYTAAQQT ADWGAPLGPG NTLTIRIFQL SALVGRGAAQ IVTLTF
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