Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3053 |
Symbol | |
ID | 4581617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 232485 |
End bp | 233912 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639770377 |
Product | amidase |
Protein accession | YP_916830 |
Protein GI | 119385775 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.807445 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGTG ACATTCTTGA TCTCGATGCG ACAGCGCAGG CTGCGGCCGT CGCGAAGGGC GATGTCAGCG CGGCAGAGCT GGCCCGCGCC GCGATTGCGA GGATCGAGGC CGGGGAGCCC GTGCTCAATG CGGTGACGCA GCGCTTTTTC GATCAGGCGC TCGATATGGC ATCAGCCGAT CTGCCGCCGG GGCCGTTTCG CGGCGTGCCC TTTCTGGTGA AGGACTTTTA CTGCCATATG GCGGGAACCC CGACCACCGG CAGCGCAAAG CTGCTGGAGC ACAACTTGAT CGACCATGAC AGCGCACTGA TGGCTCGCTA TCGCCAGGCG GGGTTTGTGA CGCTCGGCAA GACCAATGTG CCGGAAATGG TCACCATGGG CACGACCGAG CCGGTCTGGC GCGGCCCCAC GCGTAACCCC TGGAATACCG GTCATACGCC GGGCGGGTCT TCGGGTGGCT CGGCGGCGGC GGTCGCGGCG GGATATGTCG CGGTGGCCCA TGCCAATGAT GGCGCCGGAT CCATCCGCAT CCCGGCCTCA TGCTGCGGTC TCTTCGGGCT GAAGCCTTCG CGGGCCCGGG TCACGCTCGG GCCGGATGTT GGCGAGGCCA TCGGTGGCAT CACGGCGGAA CATGTGGTTT CGCGATCCGT GCGGGACAGT GCGGCGGTGC TCGACGCCAC CGCCGGAGCC CTGCCGGGAG ACCCCTATAT CGCCCCCGAG CCGCCGGAAG GCTTCCTTGC CGCCATCGCC AGACCGCGCA AGGGGCTGCG GATCGGCCTG ACGCTCGATG CGCCGGACGG CACCAGCGCC GCGCCGGAAT GTCAAGCTGC GGCTCTGCGG GCGGCGGTGC TCTTGCGTGA TCTTGGTCAT CAGGTCGAGG AGGTCACGTT GCCCTTCGAC GGCGCCGCCT TCCGCGCGGC GCTCTCCACC TTCTGGCCGA TGACCGTGAC CCGGGGCCTC AGCGCGATTG CGGAGGCCCG GGACGCGGAC CCCGAAGTTC TGTTGCGCGA GCTTGAGCCC TTTAACCAGC ATCTCTTCGC TCTTGGGATC TCGCGCCGGG CGGTAGATTA CATCCGGGAT CTTGTGATCT TTCAGGGAAT GGCGCGGGCC ATGGGGCAGT TCTTTGCCAC ACAGGATATC TGGCTTTCGC CGGTCCTGCC CTTCACGCCG CCCCGGCTTG GCTATTTTGA TGCGGGTGTC CTGGGCGGGG AAACGGCCTG GAACCGGGTG CTCGACTCCT TCATGTTCAC TGCGCCCGCC AATGTCACCG GCCTGCCTTC TGCCAGCTTG CCGATGACCG TGTCGAATGA GGGGCTTCCC ATAGGCATCC AGTTGACGGC GAAGCTGAAT GACGAAGCGC TCATCTTCAA CCTCGCAGCG CAGCTTGAAG CCGCAAACCC CTGGGCGATG CCTAGGCACA AGATCTAA
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Protein sequence | MISDILDLDA TAQAAAVAKG DVSAAELARA AIARIEAGEP VLNAVTQRFF DQALDMASAD LPPGPFRGVP FLVKDFYCHM AGTPTTGSAK LLEHNLIDHD SALMARYRQA GFVTLGKTNV PEMVTMGTTE PVWRGPTRNP WNTGHTPGGS SGGSAAAVAA GYVAVAHAND GAGSIRIPAS CCGLFGLKPS RARVTLGPDV GEAIGGITAE HVVSRSVRDS AAVLDATAGA LPGDPYIAPE PPEGFLAAIA RPRKGLRIGL TLDAPDGTSA APECQAAALR AAVLLRDLGH QVEEVTLPFD GAAFRAALST FWPMTVTRGL SAIAEARDAD PEVLLRELEP FNQHLFALGI SRRAVDYIRD LVIFQGMARA MGQFFATQDI WLSPVLPFTP PRLGYFDAGV LGGETAWNRV LDSFMFTAPA NVTGLPSASL PMTVSNEGLP IGIQLTAKLN DEALIFNLAA QLEAANPWAM PRHKI
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