Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3050 |
Symbol | |
ID | 4581614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 229941 |
End bp | 230696 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639770374 |
Product | regulatory proteins, IclR |
Protein accession | YP_916827 |
Protein GI | 119385772 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGCA GCAAAGAGAA AAGCGGACGT CTCCAGATCA ACTCCGTGGT GCGCGGGGTC AATATCCTGA CCGCCATCGC GCGCAGCGAT CAGGGGCTGA GCGTGCGCGA AATTGCCGAG GCCATTGGGG TTGAGCGGCA GACGGCCTAT CATCTGGTAC ATACGCTTGA AGATACAGGA TTTATTGCTC GCGATGATCA GCGTAATTAC CGCCTTGGCC TGCGGGTCGG GGCGCTCGCC GAGGCTTTTG GCCGACAGTT TTCTGCCCCT GATTATATGC TACCGCTGGT GCGCGGTTTG GCCACGGAAA CCGGCGAGAC CTGCTATGTC GTCGGCTGGT GGCAGGGCGA GATCGTGATC ATCGAGGTGG CCGCTGGTGC CAATGCGATC CGCGCAGCCG AGATGCCGCA TGGCCAGTAT CTGCATGCCC ATGCGCGGGC AGCGGGCAAG GTGCTACTCG CTTATGCGGC CACGGCCCGC ATGGCGGAAT ATCTGCTTAA TCATCAGCCG CTGGCAAAGC TGACCGAGAA TACCATGACC GATTTCAAAT CCCTCCAGGC CGAATTCACC CGTATCCGGG CCGAGGGCAT CGGTTATGAC AATGAGGAAT TCGCCCGCGG TACTTCCTGC ATGGCGATGC CGCTGGAAGC TGGCACCGCC CCCTATGCTC TGGCCTTGTC CGCACCAACC GAGCGCTTTC ATGCCTTCCG TGAAACCTAC CAGCAGAAAC TGGCCGCGCT GGTTCAGCGC AACTGA
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Protein sequence | MTGSKEKSGR LQINSVVRGV NILTAIARSD QGLSVREIAE AIGVERQTAY HLVHTLEDTG FIARDDQRNY RLGLRVGALA EAFGRQFSAP DYMLPLVRGL ATETGETCYV VGWWQGEIVI IEVAAGANAI RAAEMPHGQY LHAHARAAGK VLLAYAATAR MAEYLLNHQP LAKLTENTMT DFKSLQAEFT RIRAEGIGYD NEEFARGTSC MAMPLEAGTA PYALALSAPT ERFHAFRETY QQKLAALVQR N
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