Gene Pden_3050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3050 
Symbol 
ID4581614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp229941 
End bp230696 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content60% 
IMG OID639770374 
Productregulatory proteins, IclR 
Protein accessionYP_916827 
Protein GI119385772 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA GCAAAGAGAA AAGCGGACGT CTCCAGATCA ACTCCGTGGT GCGCGGGGTC 
AATATCCTGA CCGCCATCGC GCGCAGCGAT CAGGGGCTGA GCGTGCGCGA AATTGCCGAG
GCCATTGGGG TTGAGCGGCA GACGGCCTAT CATCTGGTAC ATACGCTTGA AGATACAGGA
TTTATTGCTC GCGATGATCA GCGTAATTAC CGCCTTGGCC TGCGGGTCGG GGCGCTCGCC
GAGGCTTTTG GCCGACAGTT TTCTGCCCCT GATTATATGC TACCGCTGGT GCGCGGTTTG
GCCACGGAAA CCGGCGAGAC CTGCTATGTC GTCGGCTGGT GGCAGGGCGA GATCGTGATC
ATCGAGGTGG CCGCTGGTGC CAATGCGATC CGCGCAGCCG AGATGCCGCA TGGCCAGTAT
CTGCATGCCC ATGCGCGGGC AGCGGGCAAG GTGCTACTCG CTTATGCGGC CACGGCCCGC
ATGGCGGAAT ATCTGCTTAA TCATCAGCCG CTGGCAAAGC TGACCGAGAA TACCATGACC
GATTTCAAAT CCCTCCAGGC CGAATTCACC CGTATCCGGG CCGAGGGCAT CGGTTATGAC
AATGAGGAAT TCGCCCGCGG TACTTCCTGC ATGGCGATGC CGCTGGAAGC TGGCACCGCC
CCCTATGCTC TGGCCTTGTC CGCACCAACC GAGCGCTTTC ATGCCTTCCG TGAAACCTAC
CAGCAGAAAC TGGCCGCGCT GGTTCAGCGC AACTGA
 
Protein sequence
MTGSKEKSGR LQINSVVRGV NILTAIARSD QGLSVREIAE AIGVERQTAY HLVHTLEDTG 
FIARDDQRNY RLGLRVGALA EAFGRQFSAP DYMLPLVRGL ATETGETCYV VGWWQGEIVI
IEVAAGANAI RAAEMPHGQY LHAHARAAGK VLLAYAATAR MAEYLLNHQP LAKLTENTMT
DFKSLQAEFT RIRAEGIGYD NEEFARGTSC MAMPLEAGTA PYALALSAPT ERFHAFRETY
QQKLAALVQR N