Gene Pden_3039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3039 
Symbol 
ID4581605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp216885 
End bp218168 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content60% 
IMG OID639770365 
Producthypothetical protein 
Protein accessionYP_916818 
Protein GI119385763 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCTT ACTGGAATGG CCGACAGGCA CGGCCCGACA ACCTCCGGCT GTTGACCCAT 
GAGGGTGCCT GGAAGGCGTG GGCAGATGCT GAAGAACCGA TGCCGGCGGA TCCAGAGCAT
CGGCTTCGCG GGTGCCGCTC CATCGTGACG CAGGCACTTC AGGACGTCTT GCACTCGACT
AATGTGATCA TCCTGCTCGG CTCAGGCGCA TCGTTTTGTG CGCGAAATAC GACAGGTCCT
AATGCTCCGG GCATGCGGGA TTTATGGGTT GGGGTGCGGG CAGCTTGCGA AGCGCACCGC
GCCGGTGAAT TCGATGCGGT AGTGAGGGCG CTGGTTGGAA CGGCACCCGG AGTAGATCCG
GACGGCAACC CGAAGACTGG CAACATCGAA CGACTGCTCA GCCTGTGCAA AATGCGCCTC
GAGCTTCTGT CGGTGAAAGA GGAAACCTTG AAGAATGCGC GATCGCTGGT GGACGATCCC
GGGCCAGAGG AAGCCGCCGC CGTTGCGGAA ATGGAAAGTC TCTCAGCGTT CGTGTCGCTG
GCAGAGGAAG CGGTCCTAAC CAAGGTCGGC TTCGTGAATG CGACGACGGA GCTTTCGGCG
CATACGGAAC TTCTTACGAA ATTCGGTCGC AGGAGTGCTG ACAAGCCCCG GGTCAAGATT
TTTACGACGA ACTACGACTT GTGTATCGAG GAGGCGGCAC TCCGGCTCAA TGCGGTTCTC
GTGGATGGAT TTTCGCACAG CGCGCGGCAG CGATACAATC GAGACAACTT CGATCATGAT
ATCGTCCGCC GGCGCAACGG CACCGCACGC GCAGACTTCG TCGACGGTGT CTTCCAACTC
TACAAACTGC ATGGCTCTGT CGACTGGAGA CGTGTCGGCG ACCACGTCTT CCGCAGTTTG
GATATGGATT TTGAGCACGG CGCACCCGTC CTGATCTACC CCCGGTCTAC GAAATATCAG
GAGGCGTTCG ATAGCCCCTA TCTCGATATG TTCGCGGCAT TGCAGGCCGG GTTAAGGGAG
CCCGATACGA CACTGATCAT CGCGAAGACC CCGCCCCACC GGACGGCGCT GTTGCGCAAA
TCAGCCGATG ACCGGACTTC CCCTTTCCCC GGGCACACCT ATCCTGCAGC CACGGTCATC
GGGATACCGA GTGCTGTGAA GCGGTTGAGG ACCGCCGCGC GGATCTGGAC CTCTGCCACC
TGGCGGTCGA AGTCTCGCGA CATCAGCCGC TGGCCGAGCA GCTTCACGCA GTTCATTTTT
GTTTCGACCC TGCTGCGGCG GTGA
 
Protein sequence
MTSYWNGRQA RPDNLRLLTH EGAWKAWADA EEPMPADPEH RLRGCRSIVT QALQDVLHST 
NVIILLGSGA SFCARNTTGP NAPGMRDLWV GVRAACEAHR AGEFDAVVRA LVGTAPGVDP
DGNPKTGNIE RLLSLCKMRL ELLSVKEETL KNARSLVDDP GPEEAAAVAE MESLSAFVSL
AEEAVLTKVG FVNATTELSA HTELLTKFGR RSADKPRVKI FTTNYDLCIE EAALRLNAVL
VDGFSHSARQ RYNRDNFDHD IVRRRNGTAR ADFVDGVFQL YKLHGSVDWR RVGDHVFRSL
DMDFEHGAPV LIYPRSTKYQ EAFDSPYLDM FAALQAGLRE PDTTLIIAKT PPHRTALLRK
SADDRTSPFP GHTYPAATVI GIPSAVKRLR TAARIWTSAT WRSKSRDISR WPSSFTQFIF
VSTLLRR