Gene Pden_3032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3032 
Symbol 
ID4581598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp208783 
End bp209553 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content68% 
IMG OID639770358 
ProductABC transporter related 
Protein accessionYP_916811 
Protein GI119385756 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGG TCGTCATCTC TACGCAGGGT CTGGGTTTCG ACCGCGACCG GCGCGTCATC 
CTGTCGGACG TCGAACTCGC TATCCGCGCG GCCGAGATCG TCGCCATATT GGGCGCGAAC
GGAGCGGGGA AATCGACGCT GCTGCGGCTT ATGCTGAAGC TGCTGCGGCC GGCGCGCGGC
AGCGTCTCTC TGTATGGCAT GCCGCTTGCC GCGATGCGCC GCCGCGACAT CGCCGCTGCC
GTCGCCTATG TGCCCCAGCA TCATACGCCG CCCTTTCCCT ATACGGTGGC GCAGGTCGCG
GGGCTGGGCA GGCTGGTGAC CTCGGGCCTG CTGAAACTTC CCGGCGCGCG GGACGAGAAG
CGGGTCCAGG CGGTTCTGGA ACGGCTCGGG ATCGCGCATC TGGCACAGCG CGACTACACC
GGCATCTCGG GCGGCGAGCG CCAGCTTGTC CTGATCGCGC GGGCGCTGGT CCAGGGCGCC
CGCATCCTGC TGATGGACGA GCCGGACGTG GGCCTCGATT ACGGCAACCA GCGCCGCTTG
CTCGACCTGA TGCGCGCGCT CGCGGCCGAG GGCCATACGA TCGTCTTTAC CACCCACCAT
CCCGATCACA CGCTCTATGC CGCCGACCGC GCGGTGCTGA TCGACGGCGG GAAAATCCTC
GCGGATGGCG GGCCTGCCTC GGTCCTCACG CCGCAGGTCA TCCACGCGGT CTATGGGGTC
CGGGTCGCCC GGGTCGGTCA CGGTCCCCAC ATTATTTTTG TCCCGGCATG A
 
Protein sequence
MSRVVISTQG LGFDRDRRVI LSDVELAIRA AEIVAILGAN GAGKSTLLRL MLKLLRPARG 
SVSLYGMPLA AMRRRDIAAA VAYVPQHHTP PFPYTVAQVA GLGRLVTSGL LKLPGARDEK
RVQAVLERLG IAHLAQRDYT GISGGERQLV LIARALVQGA RILLMDEPDV GLDYGNQRRL
LDLMRALAAE GHTIVFTTHH PDHTLYAADR AVLIDGGKIL ADGGPASVLT PQVIHAVYGV
RVARVGHGPH IIFVPA