| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3028 |
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| Symbol | |
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| ID | 4581594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 202683 |
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| End bp | 204353 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639770354 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_916807 |
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| Protein GI | 119385752 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCCC AGATCAGCGA CAGCATCGAA GAGAAGCGGG GCTTCTTCAC CCGCTGGTTC
ATGTCGACGA ACCACAAGGA TATCGGTGTC CTCTACCTGT TCACGGCGGG TCTGGCCGGG
CTGATCTCGG TCACACTCAC CGTCTACATG CGCATGGAAT TGCAGCATCC GGGTGTGCAA
TACATGTGTC TGGAAGGCAT GCGGCTGGTC GCCGACGCTG CGGCGGAATG CACGCCGAAC
GGCCATCTGT GGAATGTCGT CGTGACCTAT CACGGCATCC TGATGATGTT CTTTGTCGTG
ATCCCGGCGC TGTTCGGCGG TTTCGGCAAC TATTTCATGC CGCTGCATAT TGGTGCCCCG
GACATGGCTT TCCCGCGGCT GAACAACCTG TCATATTGGC TCTATGTCTG CGGGGTCTCG
CTTGCCATCG CCTCGCTGCT GTCGCCGGGC GGCTCGGATC AGCCGGGGGC AGGGGTGGGC
TGGGTTCTGT ATCCGCCGCT CTCCACGACC GAGGCCGGCT ATGCGATGGA CCTGGCGATC
TTTGCCGTCC ACGTCTCGGG CGCAAGCTCG ATCCTGGGCG CAATCAACAT CATCACCACC
TTCCTGAACA TGCGCGCCCC GGGCATGACG CTGTTCAAGG TGCCGCTGTT TGCCTGGGCG
GTCTTCATCA CCGCCTGGAT GATCCTGCTG TCGCTGCCGG TGCTGGCCGG GGGTATCACC
ATGCTGCTGA TGGACCGCAA CTTCGGCACG CAGTTCTTCG ATCCGGCCGG CGGCGGCGAT
CCGGTGCTGT ATCAGCACAT CCTGTGGTTC TTCGGCCATC CCGAGGTCTA CATGCTGATC
CTGCCCGGTT TCGGCATCAT CAGTCACGTC ATCTCGACCT TCGCCAGGAA GCCGATCTTC
GGTTATCTGC CGATGGTTCT GGCCATGGCC GCCATCGCCT TTCTCGGCTT CATCGTCTGG
GCGCATCACA TGTACACGGC CGGCATGTCG CTGACCCAGC AGACCTATTT CCAGATGGCG
ACCATGACCA TCGCGGTGCC CACCGGCATC AAGGTCTTCT CGTGGATCGC GACCATGTGG
GGCGGCTCGA TCGAGTTCAA GACGCCGATG CTCTGGGCCT TCGGCTTCCT GTTCCTGTTC
ACCGTCGGCG GCGTGACCGG GGTCGTCATC GCCCAGGCGC CCTTGGACCG CGTTTATCAC
GACACCTACT ATATCGTGGC GCATTTCCAC TATGTGATGA GCCTTGGCGC CGTCTTCGCG
ATCTTTGCAG GCACCTATTA CTGGATCGGC AAGATGTCGG GCCGGCAATA CCCGGAATGG
GCGGGCCAGC TGCATTTCTG GATGATGTTC ATCGGCTCGA ACCTGATCTT CTTCCCGCAG
CACTTCCTGG GCCGCCAGGG CATGCCGCGC CGCTATATCG ACTACCCGGT CGAGTTCTCG
TACTGGAACA ACATCTCGTC GATCGGCGCC TATATCTCCT TCGCCTCCTT CCTGTTCTTC
ATCGGCATCG TGTTCTACAC GCTCTTCGCC GGCAAGCCCG TGAACGTGCC GAACTACTGG
AACGAGCATG CGGACACGCT GGAATGGACC CTGCCCTCGC CGCCGCCCGA GCATACCTTC
GAGACCCTGC CCAAGCCTGA GGACTGGGAT CGCGCACAGG CGCATCGGTA G
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| Protein sequence | MSAQISDSIE EKRGFFTRWF MSTNHKDIGV LYLFTAGLAG LISVTLTVYM RMELQHPGVQ
YMCLEGMRLV ADAAAECTPN GHLWNVVVTY HGILMMFFVV IPALFGGFGN YFMPLHIGAP
DMAFPRLNNL SYWLYVCGVS LAIASLLSPG GSDQPGAGVG WVLYPPLSTT EAGYAMDLAI
FAVHVSGASS ILGAINIITT FLNMRAPGMT LFKVPLFAWA VFITAWMILL SLPVLAGGIT
MLLMDRNFGT QFFDPAGGGD PVLYQHILWF FGHPEVYMLI LPGFGIISHV ISTFARKPIF
GYLPMVLAMA AIAFLGFIVW AHHMYTAGMS LTQQTYFQMA TMTIAVPTGI KVFSWIATMW
GGSIEFKTPM LWAFGFLFLF TVGGVTGVVI AQAPLDRVYH DTYYIVAHFH YVMSLGAVFA
IFAGTYYWIG KMSGRQYPEW AGQLHFWMMF IGSNLIFFPQ HFLGRQGMPR RYIDYPVEFS
YWNNISSIGA YISFASFLFF IGIVFYTLFA GKPVNVPNYW NEHADTLEWT LPSPPPEHTF
ETLPKPEDWD RAQAHR
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