Gene Pden_3025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3025 
Symbol 
ID4581591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp201003 
End bp201674 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content68% 
IMG OID639770351 
Producthypothetical protein 
Protein accessionYP_916804 
Protein GI119385749 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2846] Regulator of cell morphogenesis and NO signaling 
TIGRFAM ID[TIGR03652] iron-sulfur cluster repair di-iron protein 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAGA CCACATTCCC ATTGCACGAC CGGACGGTCG GCGAGATCGC CGCGCGGCTT 
CCCGGCGCGT CCGGCGTGTT CCGCCGCTTC GGCATCGATT TCTGCTGCCA CGGAGAGGTG
CCGCTGGCAG AGGCAGCCAA TCGGCGCCAG CTGGACCTTG GCGCGCTCGA GGCGGTCCTG
GGCGACCTCG ATCCCCTGGC GATCCCCGAT GCGCCACGGG AGACCGGGGC GCTGATCGAC
CATATCCAGA CCCGCTATCA CCAGGCGCAT CGCCGGCAGA TCCCCGAACT GATCGCGCTT
TCGCGCAAGG TCGAGGCGGT CCATGCCGGC CACCCGGAGG TGCCCGGCGG CCTGGCCGAC
CTGCTGCAGC GGATATGGGG CGAGTTGGAG GTGCATATGA AGAAGGAAGA GTTGATCCTG
TTCCCGGCCA TGCGCCGGCA GGCGGCGGAC CGGATTGCCG TCCCCATCGC CGAGATGCGG
CATGATCACG ACGATCACGG CGCCTTCCTG GCAGAGCTGG CGCGGCTGAC GCAGGACCAT
ACCGTGCCCG AGGGCGCCTG CCGGACCTGG CAGGCGCTTT ACGCCGGGAC CGCGCAGCTG
CGGGCCGACC TGATGGAGCA TATCCATCTG GAAAACAACG TGCTGTTCCC GCGCTTTGAA
AAGGGCGCAT GA
 
Protein sequence
MPQTTFPLHD RTVGEIAARL PGASGVFRRF GIDFCCHGEV PLAEAANRRQ LDLGALEAVL 
GDLDPLAIPD APRETGALID HIQTRYHQAH RRQIPELIAL SRKVEAVHAG HPEVPGGLAD
LLQRIWGELE VHMKKEELIL FPAMRRQAAD RIAVPIAEMR HDHDDHGAFL AELARLTQDH
TVPEGACRTW QALYAGTAQL RADLMEHIHL ENNVLFPRFE KGA