| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3008 |
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| Symbol | |
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| ID | 4581574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 180896 |
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| End bp | 182563 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639770334 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_916787 |
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| Protein GI | 119385732 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1021] Peptide arylation enzymes |
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| TIGRFAM ID | [TIGR02275] 2,3-dihydroxybenzoate-AMP ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0424052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.64241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGATC ACGCTCTGGA CTGGCAGGCC CGCTGCCCGT TCTGGCCCCG GGACGTTGCT
GACCGTTACC GCGAGGCCGG GATCTGGCGA TACGAGACAT TCTTCGACCT TCTGGCGCGG
CAAGCCGGGC GGCTGGGTCG GCGGATCGCC CTGATCGACG GTGCGCGGCA GATCGGTTAC
GACCGGTTGC ACTGCGATGC GCTGGCATTG GCGGGCGGGC TTTCGGCGCT GGGGCTGGTC
CGCGGCGACC GGGTGGTGGT GCAATTCCCC AATTGCGGGG AATTCGTCAC GCTGTTCTTC
GCGCTTTGCC GGCTGGGCGT CGTGCCGGTG CTGGCCTTGC CCGGGCATCG CGACCTTGAG
CTTGGCCAGT TTGCCGATTT CACCGGCGCC CGCGCGATCC TGACGGCACA GGAGCCCAAG
GGGTATGACA TGGTCGCGCT GGCCCGGCGG GTGCAAGAGA GGGTTCCCTC GGTTCGGCAC
GTGGTGGCGC TGGGCGACGG CCGAGACGCG ACGCCCTTCG ACAGCCTGTT CCGTCCCGAT
CTCCCGTTGC CGGCCGGTCC CAATGCCGAG GACGTGGCCT GTTTCCAGAT CTCGGGCGGG
ACGACCGGCG TGCCCAAGCT GATCCCGCGC CGGCACATGG AATATCTCTA CAACATCCGG
ATGGCGGTGG CGGCCAGCGG GCTGGACGGC GATACGCGCT ATCTGTGCGT TCTGCCGATG
ATGCACAACT TCCCGATGGC CTGTCCGGGT TTCCTGGGCA CGCTGTGGGC CGGGGGCACG
GTGGTCGTCG CACCCGAGCC CGAGGCCGGG ATCTGCTTCG ACCTGATCGC CCGCCATCGC
GTCACGATGA CCGCGCTGGT GCCGCCGCTG GCGCTGCTGT GGCTGGATGC GCAGGCCGGG
CTGGGGGCGG ACCTGTCGTC GCTGCAACTG CTGCAGGTCG GCGGCGCCAA GTTGAACCCG
TCCAGCGCCC GGCGCATCCG GCCGGAGCTG GGTTGCCAGC TGCAGCAGGT CTTCGGCATG
GCCGAGGGGC TGGTCTGCTT CACCGCGCTG ACCGACAGCG AGGAGCGTAT CGTGAACACC
CAGGGCCGAC CCATGTCGCC CTGGGACGAG CTGCGCATCA TCCGCCCGGA TGGGCGCGAG
GCCGCCATCG GCGAGCCGGG CGAGCTGCAG GTCCGCGGCC CCTACACGAT CCGCGGCTAT
TACGACATGG CCGGGCACAA TGCCCAGGCC TTCACCGCCG ACGGCTTCTA TCGCTCGGGC
GACATCGCGC GGCGCGACGC CGACGGCGCG ATTATCGTCG AGGGGCGGGC CAAGGACCAG
GTGAACCGGG GCGGCGAAAA GATCGGCGTG GACGAGGTCG AGGATCTGCT GGTCGCCCAT
GCCTCGGTGC TGGATGCGGC GGTGGTGGGG CGGCCCGATG CGCTGATGGG CGAAAGGCTT
TGTGCCTTCG TGCTGGCCGC GCCGGGCACC ACGCCCCGGC CGGGTGCGCT GCGCCGCCAT
CTGGCCGAGG CCGGGCTTGC CGCCTTCAAG ATCCCCGACG AGGTGATCGT GCTGGATCGC
TTTCCGCAAA CCGGCGTCGG CAAGGTCAAC AAGCGCCAGT TGCGCGAGCA ACTGCGCGAG
GCGCATTTCC CCGATCCCGT CGCTGCCCGG CAGGAGGAGA GTGCATGA
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| Protein sequence | MADHALDWQA RCPFWPRDVA DRYREAGIWR YETFFDLLAR QAGRLGRRIA LIDGARQIGY
DRLHCDALAL AGGLSALGLV RGDRVVVQFP NCGEFVTLFF ALCRLGVVPV LALPGHRDLE
LGQFADFTGA RAILTAQEPK GYDMVALARR VQERVPSVRH VVALGDGRDA TPFDSLFRPD
LPLPAGPNAE DVACFQISGG TTGVPKLIPR RHMEYLYNIR MAVAASGLDG DTRYLCVLPM
MHNFPMACPG FLGTLWAGGT VVVAPEPEAG ICFDLIARHR VTMTALVPPL ALLWLDAQAG
LGADLSSLQL LQVGGAKLNP SSARRIRPEL GCQLQQVFGM AEGLVCFTAL TDSEERIVNT
QGRPMSPWDE LRIIRPDGRE AAIGEPGELQ VRGPYTIRGY YDMAGHNAQA FTADGFYRSG
DIARRDADGA IIVEGRAKDQ VNRGGEKIGV DEVEDLLVAH ASVLDAAVVG RPDALMGERL
CAFVLAAPGT TPRPGALRRH LAEAGLAAFK IPDEVIVLDR FPQTGVGKVN KRQLREQLRE
AHFPDPVAAR QEESA
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