Gene Pden_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3005 
Symbol 
ID4581571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp177218 
End bp177655 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content48% 
IMG OID639770331 
Producthypothetical protein 
Protein accessionYP_916784 
Protein GI119385729 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00286306 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGGAA AATTCGTCGC CATAGCCTTC CTTACAGCCA ACATGGCATT CTCTGCGTCA 
GCACAGCCTG CCCCGTTGGA GGAGTTATTT CTTAAAGTTG CAGCAGGCGA GGATGGGAAG
CCCACAATTT CGCAAGACGA GTTCCAACTT TCCAAGAATG AATATTATCG CCTCAACTTT
GTTTGTGCGG AAGATGCCGG TGACACAGGA TTTCAATTCG AGTCCGTGCC TTTGCTGTCG
AACTCGCATC TGAGAGTCAT CAGTATTGAG GGCCAGGAGA TTCATATTCA GGGTCTGAGT
TTTCATGCCC TCCAATGCGA CGAGGCAGGA ACAATACGCT TCAGTTTTTA TCCGATCCGT
TCCGGTACCT TTGAATTCAC TGTGCAAGAC CACGAAGAAC CTGCCAATAT CATCAGGGGA
AAATTTGTGG TCGAATAG
 
Protein sequence
MNGKFVAIAF LTANMAFSAS AQPAPLEELF LKVAAGEDGK PTISQDEFQL SKNEYYRLNF 
VCAEDAGDTG FQFESVPLLS NSHLRVISIE GQEIHIQGLS FHALQCDEAG TIRFSFYPIR
SGTFEFTVQD HEEPANIIRG KFVVE