| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2993 |
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| Symbol | |
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| ID | 4581559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 166833 |
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| End bp | 168731 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639770319 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_916772 |
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| Protein GI | 119385717 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.391865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.445791 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGGA ACACCCCGAA GGCAAGGGGC GCGTCGAGCC TTGCGATGGC CGTGGCCATG
GGCCTTGCCG TCCTGACGAC CGCGCCGGCG ACCGCCAATG ACCAGTTGGT CGAACTGGCC
AAGGACCCCG CGAACTGGGT CATGACCGGG CGCGACTACA ACGCGCAGAA CTATTCCGAG
ATGACCGACA TCAACAAGGA GAACGTCAAG CAGCTGCGGC CCGCCTGGTC GTTCTCGACC
GGGGTGCTGC ATGGGCACGA AGGTACGCCG CTGGTCGTCG GCGACCGGAT GTTCATTCAC
ACGCCCTTCC CGAACACCAC CTTCGCGCTG GACCTGAACG AGCCGGGCAA GATCCTGTGG
CAGAACAAGC CCAAGCAGAA CCCCACGGCC CGGACTGTGG CCTGCTGCGA CGTGGTCAAC
CGCGGCCTGG CCTATTGGCC GGGCGACGAT CAGGTCAAGC CGCTGATCTT CCGCACCCAG
CTCGACGGCC ATATCGTCGC CATGGATGCC GAGACCGGCG AGACGCGCTG GATCATGGAG
AACTCGGACA TCAAGGTCGG CTCGACCCTG ACCATCGCGC CCTATGTCAT CAAGGACCTG
GTGCTGGTCG GCTCCTCGGG CGCCGAGCTG GGCGTGCGCG GCTATGTCAC CGCCTATGAC
GTGAAATCGG GCGAGATGCG CTGGCGCGCC TTTGCCACCG GCCCAGACGA GGAATTGCTG
CTGGCCGAGG ACTTCAACGC CCCGAACCCG CATTACGGCC AGAAGAACCT GGGCCTGGAG
ACCTGGGAGG GCGACGCCTG GAAGATCGGC GGCGGCACCA ACTGGGGCTG GTATGCCTAT
GACCCCGAGG TGGACCTGTT CTACTACGGC TCGGGCAACC CCGCGCCCTG GAACGAGACC
ATGCGTCCGG GCGACAACAA GTGGACCATG GCGATCTGGG GCCGCGAGGC CACCACCGGC
GAGGCGAAAT TCGCCTATCA GAAGACGCCG CATGACGAAT GGGACTATGC CGGCGTCAAC
GTGATGATGC TGTCGGAACA GGAGGACAAG CAGGGCCAGA TGCGCAAGCT TCTGACCCAC
CCGGACCGCA ACGGCATCGT CTACACGCTG GACCGCACCA ATGGCGACCT GATCTCGGCC
GACAAGATGG ACGACACGGT CAACTGGGTG AAGGAGGTGC AGCTGGATAC CGGCCTGCCG
GTGCGCGACC CGGAATTCGG CACGCGCATG GACCACAAGG CCCGCGACAT CTGTCCCTCG
GCGATGGGCT ATCACAACCA GGGCCATGAC AGCTACGACC CCGAGCGCAA GGTGTTCATG
CTGGGCATCA ACCACATCTG CATGGATTGG GAGCCCTTCA TGCTGCCCTA TCGCGCCGGC
CAGTTCTTCG TCGGCGCCAC GCTGACCATG TATCCGGGCC CCAAGGGCGA CCGCCAGAAC
GCGCTGGGGC TGGGCCAGAT CAAGGCCTAC GACGCCATCT CGGGCGAGAT GAAATGGGAA
AAGATGGAGC GCTTCTCGGT CTGGGGCGGC ACCATGGCCA CCGCGGGCGG GCTGACCTTT
TACGGCACGC TGGACGGCTT CATCAAGGCC CGCGACAGCG ACACCGGCGA CCTGCTGTGG
AAGTTCAAGC TGCCCTCGGG CGTGATCGGC CATCCGATGA CCTACAAGCA TGACGGCCGG
CAATATGTCG CGATCATGTA TGGAGTCGGC GGCTGGCCGG GCGTGGGTCT GGTCTTCGAC
CTGGCCGACC CGACCGCCGG TCTGGGCTCG GTGGGCGCGT TCAAGCGGCT GCAGGAGTTC
ACCCAGATGG GCGGCGGCGT GATGGTCTTC TCGCTTGACG GCGAGAGCCC CTATTCCGAC
CCGAACGTGG GCGAATACGC GCCGGGTGAG CCCACCTGA
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| Protein sequence | MNRNTPKARG ASSLAMAVAM GLAVLTTAPA TANDQLVELA KDPANWVMTG RDYNAQNYSE
MTDINKENVK QLRPAWSFST GVLHGHEGTP LVVGDRMFIH TPFPNTTFAL DLNEPGKILW
QNKPKQNPTA RTVACCDVVN RGLAYWPGDD QVKPLIFRTQ LDGHIVAMDA ETGETRWIME
NSDIKVGSTL TIAPYVIKDL VLVGSSGAEL GVRGYVTAYD VKSGEMRWRA FATGPDEELL
LAEDFNAPNP HYGQKNLGLE TWEGDAWKIG GGTNWGWYAY DPEVDLFYYG SGNPAPWNET
MRPGDNKWTM AIWGREATTG EAKFAYQKTP HDEWDYAGVN VMMLSEQEDK QGQMRKLLTH
PDRNGIVYTL DRTNGDLISA DKMDDTVNWV KEVQLDTGLP VRDPEFGTRM DHKARDICPS
AMGYHNQGHD SYDPERKVFM LGINHICMDW EPFMLPYRAG QFFVGATLTM YPGPKGDRQN
ALGLGQIKAY DAISGEMKWE KMERFSVWGG TMATAGGLTF YGTLDGFIKA RDSDTGDLLW
KFKLPSGVIG HPMTYKHDGR QYVAIMYGVG GWPGVGLVFD LADPTAGLGS VGAFKRLQEF
TQMGGGVMVF SLDGESPYSD PNVGEYAPGE PT
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