Gene Pden_2987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2987 
Symbol 
ID4581553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp160576 
End bp161202 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content72% 
IMG OID639770313 
Productanaerobic ribonucleoside-triphosphate reductase activating protein 
Protein accessionYP_916766 
Protein GI119385711 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID[TIGR02495] anaerobic ribonucleoside-triphosphate reductase activating protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.39802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTGAGA TCCGCATCGG CGGCCTGCAG CGCCTGTCCA GCTGCGACTG GCCGGGCGAA 
CTGGTCGCCA CCCTTTTCCT GCAGGGCTGT CCCTGGGACT GCCCCTATTG CCACAACCCG
CATCTCATCC CGCCCGAGGC CGAGGGGACG CTGGATTGGC AAGAGGTCCT GGGCTTTCTG
GCGGGACGGC GCGGCCTGCT TGACGGCGTA GTGTTCTCGG GCGGGGAGCC GACGCTTCAG
CGCGGCCTGC CCGAGGCGTT GCGGGCGGTC CGGGCCCTGG GGTTCAGGAC CGGCCTGCAC
ACGGCCGGCC CCTACCCCGC TCGGCTTGCG GCGGTGCTGC CGCTTTGCGA CTGGGTCGGC
TTCGACGTGA AGGCGCCGTT TTCCGGCTAT CGGCGGGTGA CGGGCGCAGC CGGCAGCGGC
GACAGGGCCA GGGAAAGCCT GCGGCTGCTG CTGGCCAGCG GCACGGCCCA CCAGGTGCGC
ACGACGGTCG ATCCCACCCT GATCGACGGG GCGGCCTTGG CGCGGATGGG CGCGGAACTG
GCGGCGCTGG GTGTCGCCGA CCATGTCCTG CAGACCTGCC GCAGCACCGG AACACGCACG
AGCCGTCCGG TGCACCTGCA GGGCTGA
 
Protein sequence
MAEIRIGGLQ RLSSCDWPGE LVATLFLQGC PWDCPYCHNP HLIPPEAEGT LDWQEVLGFL 
AGRRGLLDGV VFSGGEPTLQ RGLPEALRAV RALGFRTGLH TAGPYPARLA AVLPLCDWVG
FDVKAPFSGY RRVTGAAGSG DRARESLRLL LASGTAHQVR TTVDPTLIDG AALARMGAEL
AALGVADHVL QTCRSTGTRT SRPVHLQG