Gene Pden_2982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2982 
Symbol 
ID4581548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp157622 
End bp158386 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content70% 
IMG OID639770308 
ProductABC transporter related 
Protein accessionYP_916761 
Protein GI119385706 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.200508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.223625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGC TGGAGGAGGC AAGCTGGCGC GCGGGCCAGA CCGCCATCGT CCGGGACATC 
GCCCTGCATG TGCGCAGGGG CGAGACCTTC GGCCTTGTCG GTCCCAACGG CTCGGGCAAA
TCGACGGTGC TGCGGCTGGT CGCGGGGGTG CTGACGCCCT CGACGGGCAG GGTCCGGCTG
GACGGGATCG ACCAGACCCG TCTGTCGCGG CGCCGGGCCG CGCGGATGGT GGCCTTCGTC
GCGCAACAGG CCGATACGGC CGAGCGCGTG ACCGTGCGCG ATGCGGTCGA GCTGGGCCGC
ACGCCCTGGC TCTCCATGCT GCGCCCCTTC GGCCCCGGGG ATGACCGGAT CGTGGCCCAT
GCCCTGGCCC GCGTCGGCAT GTCGGACAAG GCTGGACGCT ACTGGCAGGG GCTTTCGGGG
GGCGAGCGCC AGCGCGTCCA TCTGGCCCGC GCGCTGGCGC AGGAGCCGCG CATCCTGCTG
CTGGACGAGC CGACAAACCA CCTCGACATC CACCAGCAGC TGTCGATCCT GCGGCTGGTG
CGCAAGCTGG AGGTGACGGC GCTGGTCGCG CTGCACGACC TCAACCAGGC GCTGGAATGC
GACCGCGTCG GCGTCATGCA GGCCGGGCGG CTTGTGGCCT GCGGTCCGCC CGCCGAAATC
CTGACACCCG ATCTTATCGC CCGCGTGTTT GCTGTGCGGG CCAATTACCT CACCGATCCG
GCCGATGGTC ACCGGCTGAT CCGCTTTGCT TTATCGGAGG ACTGA
 
Protein sequence
MIRLEEASWR AGQTAIVRDI ALHVRRGETF GLVGPNGSGK STVLRLVAGV LTPSTGRVRL 
DGIDQTRLSR RRAARMVAFV AQQADTAERV TVRDAVELGR TPWLSMLRPF GPGDDRIVAH
ALARVGMSDK AGRYWQGLSG GERQRVHLAR ALAQEPRILL LDEPTNHLDI HQQLSILRLV
RKLEVTALVA LHDLNQALEC DRVGVMQAGR LVACGPPAEI LTPDLIARVF AVRANYLTDP
ADGHRLIRFA LSED