| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2977 |
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| Symbol | |
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| ID | 4581543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 151529 |
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| End bp | 153085 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639770303 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_916756 |
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| Protein GI | 119385701 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.826241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.256941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGACA GACCGGGCCG CACCCGCATT CTCAAAGCCG TCCTGCTGGC TTCCACGACC
TTCGTGGCCA GCGGATATGC CGCCATCGCC CAGGCCCCGC AGGCCGTGCA GCAAGAACGC
ATGGTCGCCT TCGACCTGCC GGCGCAGCCG CTTGCGGCCT CGCTGACCGG CTTTGCCCGC
AGCACCTGCA TCAAGCTGGC CTATCCGGCG GCGCTGACCC GCGGCCGGTC GGCGCCGCCG
CAGCGGGGCA GCTATTCGCC GGCAGAGGCG CTGGACCGCC TGCTGGCCGG ATCGGGGCTG
AGCTGGCGGT TCACCGGCGC GAATGCCGTG GCGATCACCG CCCCGGCCGC CGCGGCCGGG
ACCGGCGCGG CCGGCGGCGG CATCCTGCTG GACCAGATCA CGCTGACCGG GGAAAGCGCC
TGGGGGCCGG TCAGCGGCTA TGTCGCGCGG CAGACCGGGA CCGCGACCAA GACCGACACG
CCGATCGTCG AGACCCCGCA GACGATCAAC GTGATCTCGG CCGACCAGAT CAAGGCCCAG
GGCGCGGCCA GCGTGGACGA GGCGCTGCGC TATACGCCCG GCGTCTCGAC CGATTTCTAC
GGCGGGGCGA CCTATAACGA CTATGTCCGG CTGCGCGGCT TCGTGGCGCC GATCTTTGCC
GAGGGGATGC GCATGCCTTC GGGGCTGCGC GACTATGCGC AGCTGCGCCA CGAGCCCTAT
GGGCTCGAGC GGGTCGAGGT GCTGAAGGGC CCGTCCTCGG TGCTTTACGG GCAAGCGGCG
CCAGGCGGCA TGGTCAACGC GCTGCGCAAG CGCCCGACCG CAGAAAGGCT TCGCGAGTTG
CAGCTGCAAG CCGGCAGCTT CGGGCGCAAC CAGGGCGCAT TCGACCTGGG CGGGCCGCTC
GATGCCGGCA AGACCCTGAC CTACCGGCTG ACCGGGTTGC TGCGCGACAG CGGCACGCAG
GTCGAGGCGT TGCGCGACGA CCGCGCCTTC CTGGCGCCCA GCCTGACATG GCGGCCGGAT
GCCGATACCG CGCTGACCCT CTATGGCCAT TACCAGCATG ATGTCGGCGG CAACAGCCCG
CTGCCGGCAC TCGGCACGGT CTATCCGACG CAATTCGGCC ATCTGCCCGT GGATGCGTTC
CTGGGCTACC CGGATTTCAA TCGCTACAAG CGCGACCAGT TCTCGCTGGG ATACGAGTTC
GAGCACCGTT TCGACGACAG GTTCCAGTTG CACCACAAGC TGCAATATTC GAACATCGAG
ATGGACTACC GCTATTCGGT GCTGTCGGGC CTGCAGACCG ATCCGGCGAC GGGGCGCATC
AGCCTGAACA GGTCGATCCA GCACCCCCAT GACACCGCCA CCGCGCTGAC CATGGACAAC
AACCTGCAGG CGGATTTCGA CACCGGCCCC CTGCGGCACA GCCTGCTGGT GGGGCTGGAC
TATACCCGGC TGGATTTCGA TTCCCACTGG GGTGGCGACT ATACCGCCGG CCGGGTCGAT
GTCTTTGCCC CCCATCACGA CAACCGGCCG GCCGATCCGG TGCTTTATCC CGACTAG
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| Protein sequence | MPDRPGRTRI LKAVLLASTT FVASGYAAIA QAPQAVQQER MVAFDLPAQP LAASLTGFAR
STCIKLAYPA ALTRGRSAPP QRGSYSPAEA LDRLLAGSGL SWRFTGANAV AITAPAAAAG
TGAAGGGILL DQITLTGESA WGPVSGYVAR QTGTATKTDT PIVETPQTIN VISADQIKAQ
GAASVDEALR YTPGVSTDFY GGATYNDYVR LRGFVAPIFA EGMRMPSGLR DYAQLRHEPY
GLERVEVLKG PSSVLYGQAA PGGMVNALRK RPTAERLREL QLQAGSFGRN QGAFDLGGPL
DAGKTLTYRL TGLLRDSGTQ VEALRDDRAF LAPSLTWRPD ADTALTLYGH YQHDVGGNSP
LPALGTVYPT QFGHLPVDAF LGYPDFNRYK RDQFSLGYEF EHRFDDRFQL HHKLQYSNIE
MDYRYSVLSG LQTDPATGRI SLNRSIQHPH DTATALTMDN NLQADFDTGP LRHSLLVGLD
YTRLDFDSHW GGDYTAGRVD VFAPHHDNRP ADPVLYPD
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