Gene Pden_2970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2970 
SymbolrpsI 
ID4581537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp140856 
End bp141335 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content68% 
IMG OID639770297 
Product30S ribosomal protein S9 
Protein accessionYP_916750 
Protein GI119385695 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0570988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.349655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAG ACATCAAAAC CCTCGACGAT CTGAAATCGG TCGCGACGGC TGCCCCGGCC 
GCCGCCCCGG TTCGTGAGGC GCAGCGCGAT TCGCTGGGCC GTTCCTATGC CACCGGCAAG
CGCAAGGACG CGGTCGCCCG CGTCTGGGTC AAGCCGGGTT CGGGCAAGGT GGTCGTGAAC
GGCAAGGATA TCGCGGAATA CTTCGCCCGT CCGGTGCTGC AGATGATCCT GCGCCAGCCT
TTCGAAGTGG CCGGCGTCAC GGGCCAGTAT GACGTCTACG CCACCGTCGC CGGCGGCGGC
CTGTCGGGCC AGGCGGGTGC GGTCAAGCAC GGCATCTCGA AGGCGCTGCA ACTGCACGAG
CCCAGCCTGC GCCCGGCGCT GAAGGCGGCC GGCTTCCTGA CCCGCGATTC GCGCGTGGTC
GAACGGAAGA AATACGGCAA GGCCAAGGCC CGCCGCTCGT TCCAGTTCTC GAAGCGCTAA
 
Protein sequence
MAEDIKTLDD LKSVATAAPA AAPVREAQRD SLGRSYATGK RKDAVARVWV KPGSGKVVVN 
GKDIAEYFAR PVLQMILRQP FEVAGVTGQY DVYATVAGGG LSGQAGAVKH GISKALQLHE
PSLRPALKAA GFLTRDSRVV ERKKYGKAKA RRSFQFSKR