Gene Pden_2968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2968 
Symbol 
ID4581535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp139815 
End bp140237 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content68% 
IMG OID639770295 
Producthypothetical protein 
Protein accessionYP_916748 
Protein GI119385693 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00559031 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.342392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTGG CAATGGGCCG CGAGGCGCTG AACGAGTTTC TGGACAGGGT CTTTCCGCAG 
ATCGCCGGAC AGGTCCGGGT GGAATCGCTG GACGAGGCGC GGCTGACCGC GCGGCTGGCG
GTGGACGACC AGCACCTGCG CCCGGGCGGC ACGGTCAGCG GTCCGGCCAT GTTCGCGCTG
GCCGACGTCA CGATCTACCT GGCCATCCTG GCCCGGATCG GCGAGGTGGC GCTGGCGGTG
ACCACCAATG CCTCGATCGA CTTCATGCGC AAGCCCGAGG CCGGACGAGA CCTTCTGGCC
GAATGCCGCA TCCTGAAGCT GGGCCGCATC CTGGCCGTGG GCGAGGTGCT GATCCGTTCC
GAAGGCGCCG AAGAGCCGGT GGCGCGCTGC TCGATGACCT ATTCGATTCC GCCGAAACGC
TGA
 
Protein sequence
MALAMGREAL NEFLDRVFPQ IAGQVRVESL DEARLTARLA VDDQHLRPGG TVSGPAMFAL 
ADVTIYLAIL ARIGEVALAV TTNASIDFMR KPEAGRDLLA ECRILKLGRI LAVGEVLIRS
EGAEEPVARC SMTYSIPPKR