Gene Pden_2960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2960 
Symbol 
ID4581527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp128477 
End bp129601 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content70% 
IMG OID639770287 
Productmetal dependent phosphohydrolase 
Protein accessionYP_916740 
Protein GI119385685 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.740191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.529294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC TGACCCTGCG CTTTGCCTTC CTGACCGAGG CCGACCGGCT GAAATCCGTC 
GAGCGGGCGA ATGTGCTGAT GGACCTGTCG CGGCCGGAAA ACAGCGCCGA GCACAGCTGG
CACGTCGCGC TTTACGCGCT GGTCTTCGGC GCCTCGGACC GTGCCATCGC GATGCTGCTG
CTGCACGATC TGGTCGAGAT CGACTGCGGC GACCATCCGA TCCATCTGGT CCATGACACG
GCTGCCGTGC AGGCGGCCGA GGACGCCGCC GCGCGCCGGC TGTTCGGCAT GTTGCCCGGC
GGCGAGACGC TGCTGGCGCT GTGGCGGGAG TTCGAGGCCG GCGAAAGCCC GGACGCCCGC
ATCGCCAAGC GCATGGACCA CGTCCAGCCG CTGTTCCAGG TGCTTTGCGC GCCCCGGCCC
CTGGCCGATC ATGTCGGAAT CGTCCGCGAC AACATGACAT CGGGCCGTGC CCGGCGGCTG
TGGGCGGAAT GGCCCGAGGC GATGGAGGCG GCGCAGGCCC TGCTGGAGGG CCGCGCGCCC
TGCGGCGAAC TGGCGCAGCG CCTGGCCTTT CTGGCCGAGG CCGACCGGCT GAAATCGGTG
CTGCGCGCCA GCCTGCTGTG CGACGGCTCG CGGCGCGAAA ACAGCGCCGA GCACAGCTGG
CACCTGGCGC TTTACGCGCT GGTCATGGCG GCCCATGCCG GGCCGGGGGT GGAGATCGGC
CGGGTGATCC GCATGCTGCT GCTGCACGAC CTGGTCGAGA TCGACACCGG CGACGTGCCG
ATCCATGCGC AGAACGGCGC CGCCCATCAC GGTGCCGCGC AGTTGCAGGC CGAGGCCGAG
GCGGCGGAAC GGATCTTCGG GCTGCTGCCC AAGGCCCAGG GGGCTGAATT GCGCGCGCTC
TGGACCGAGT TCGAGGCGAA CGAGACCCCC GACGCGGTCT TCGCCAAGTC GCTCGACCGG
GCGCAGCCGG TGATGCAGAA CATCGCCTCG GGCGGCGGCA CCTGGGTCGA ATACCGGGTG
AGCTACGAGC AACTGGTCGA GCGCGTGGGC CTGCGCATCG AGCGCGGGGC GCCGACGCTG
TGGACCTGGC TCAGCGAAAG CGCGCGGGTC TATTTCCGCG GCTGA
 
Protein sequence
MTDLTLRFAF LTEADRLKSV ERANVLMDLS RPENSAEHSW HVALYALVFG ASDRAIAMLL 
LHDLVEIDCG DHPIHLVHDT AAVQAAEDAA ARRLFGMLPG GETLLALWRE FEAGESPDAR
IAKRMDHVQP LFQVLCAPRP LADHVGIVRD NMTSGRARRL WAEWPEAMEA AQALLEGRAP
CGELAQRLAF LAEADRLKSV LRASLLCDGS RRENSAEHSW HLALYALVMA AHAGPGVEIG
RVIRMLLLHD LVEIDTGDVP IHAQNGAAHH GAAQLQAEAE AAERIFGLLP KAQGAELRAL
WTEFEANETP DAVFAKSLDR AQPVMQNIAS GGGTWVEYRV SYEQLVERVG LRIERGAPTL
WTWLSESARV YFRG