Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2955 |
Symbol | |
ID | 4581522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 123627 |
End bp | 124850 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639770282 |
Product | saccharopine dehydrogenase |
Protein accession | YP_916735 |
Protein GI | 119385680 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGCCAAGA ACGTGCTCAT CATCGGCGCC GGCGGCGTCG CCCAGGTGGT CGCGCACAAG GTGGCGCAGA ACGCCAAGGA ATTCGGAACG CTGCATATCG CCAGCCGAAC CGTGTCCAAG GCCGAGAAGA TCATCGCGAG CATTCGTGAA AAGGGCCATT CGGTCGAATT CACCGCGCAT CCGCTGGACG CGATGGACAG CAAGGCCGTG GCCGAGCTGA TCCGCGGGAT CGAGGCCGGC ATCGTCATCA ACGTCGGCTC GGCCTTCGTC AACATGACCG TGCTGCAAGG CTGCATCGAC ACCGGCGCCG CCTATATCGA CACCGCCATC CACGAGGATC CCGCCAAGGT CTGCGAGACG CCGCCCTGGT ATGCCAACTA CGAATGGAAG CGCCGCGAGG ACTGCGCGGC TGCCGGCGTC ACCGCCATCC TGGGCGCGGG TTTCGACCCG GGCGTGGTCA ACGCCTATGC CCGGCTGGCC GAGGACGAGT ATTTCGACAA GATCGACTCG ATCGACATCG TGGACATCAA CGCCGGCAGC CACGGCCGCT GGTTCGCCAC CAATTTCGAC CCCGAGATCA ATTTCCGCGA ATTCACCGGC ACCGTCTATA GCTGGCAGGG CGGCGAATGG CGCCAGAACA AGATGTTTGA GGTCGGCCGC GAATGGGACC TGCCCGTCGT CGGCAAGCGC ACCGCCTATC TCTCCGGCCA TGACGAGGTG CACAGCCTCT CGGCCCGCTA CAAGGACGCC GACGTGCGCT TCTGGATGGG CTTCGGCGAG CATTACATCA ACGTCTTCAC CGTGCTGAAG AACCTGGGCC TGCTCAGCGA GCAGCCGGTC AAGACCGCCG AGGGGCAGGA GGTCGTGCCG CTGAAGGTGG TCAAGGCCGT GCTGCCCGAC CCCGCGAGCC TCGCGCCCGA TTACGAGGGC AAGACCTGCA TCGGCGACCT GGTCAAGGGC ACGCTGGACG GCAAGCCGGG CGAGGTCTTC ATCTACAACG TCGCCGACCA CAAGGACGCC TATAACGAAG TCGGCAGCCA GGGCATCAGC TATACCGCGG GCGTGCCGCC GGTCGCGGCG GCGATCCTGG TCGCGCGCGG CACCTGGGAC GTGAAGCGCA TGGTCAACGT CGAGGATCTG GCGGCCCGCC CCTTCCTTGA ACTGCTGGGC GAACTGGGCC TGCCCACCCG TGTCATCGAC GCCACCGGCG ACCACCCGCT GTAG
|
Protein sequence | MAKNVLIIGA GGVAQVVAHK VAQNAKEFGT LHIASRTVSK AEKIIASIRE KGHSVEFTAH PLDAMDSKAV AELIRGIEAG IVINVGSAFV NMTVLQGCID TGAAYIDTAI HEDPAKVCET PPWYANYEWK RREDCAAAGV TAILGAGFDP GVVNAYARLA EDEYFDKIDS IDIVDINAGS HGRWFATNFD PEINFREFTG TVYSWQGGEW RQNKMFEVGR EWDLPVVGKR TAYLSGHDEV HSLSARYKDA DVRFWMGFGE HYINVFTVLK NLGLLSEQPV KTAEGQEVVP LKVVKAVLPD PASLAPDYEG KTCIGDLVKG TLDGKPGEVF IYNVADHKDA YNEVGSQGIS YTAGVPPVAA AILVARGTWD VKRMVNVEDL AARPFLELLG ELGLPTRVID ATGDHPL
|
| |