Gene Pden_2955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2955 
Symbol 
ID4581522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp123627 
End bp124850 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content65% 
IMG OID639770282 
Productsaccharopine dehydrogenase 
Protein accessionYP_916735 
Protein GI119385680 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1748] Saccharopine dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCAAGA ACGTGCTCAT CATCGGCGCC GGCGGCGTCG CCCAGGTGGT CGCGCACAAG 
GTGGCGCAGA ACGCCAAGGA ATTCGGAACG CTGCATATCG CCAGCCGAAC CGTGTCCAAG
GCCGAGAAGA TCATCGCGAG CATTCGTGAA AAGGGCCATT CGGTCGAATT CACCGCGCAT
CCGCTGGACG CGATGGACAG CAAGGCCGTG GCCGAGCTGA TCCGCGGGAT CGAGGCCGGC
ATCGTCATCA ACGTCGGCTC GGCCTTCGTC AACATGACCG TGCTGCAAGG CTGCATCGAC
ACCGGCGCCG CCTATATCGA CACCGCCATC CACGAGGATC CCGCCAAGGT CTGCGAGACG
CCGCCCTGGT ATGCCAACTA CGAATGGAAG CGCCGCGAGG ACTGCGCGGC TGCCGGCGTC
ACCGCCATCC TGGGCGCGGG TTTCGACCCG GGCGTGGTCA ACGCCTATGC CCGGCTGGCC
GAGGACGAGT ATTTCGACAA GATCGACTCG ATCGACATCG TGGACATCAA CGCCGGCAGC
CACGGCCGCT GGTTCGCCAC CAATTTCGAC CCCGAGATCA ATTTCCGCGA ATTCACCGGC
ACCGTCTATA GCTGGCAGGG CGGCGAATGG CGCCAGAACA AGATGTTTGA GGTCGGCCGC
GAATGGGACC TGCCCGTCGT CGGCAAGCGC ACCGCCTATC TCTCCGGCCA TGACGAGGTG
CACAGCCTCT CGGCCCGCTA CAAGGACGCC GACGTGCGCT TCTGGATGGG CTTCGGCGAG
CATTACATCA ACGTCTTCAC CGTGCTGAAG AACCTGGGCC TGCTCAGCGA GCAGCCGGTC
AAGACCGCCG AGGGGCAGGA GGTCGTGCCG CTGAAGGTGG TCAAGGCCGT GCTGCCCGAC
CCCGCGAGCC TCGCGCCCGA TTACGAGGGC AAGACCTGCA TCGGCGACCT GGTCAAGGGC
ACGCTGGACG GCAAGCCGGG CGAGGTCTTC ATCTACAACG TCGCCGACCA CAAGGACGCC
TATAACGAAG TCGGCAGCCA GGGCATCAGC TATACCGCGG GCGTGCCGCC GGTCGCGGCG
GCGATCCTGG TCGCGCGCGG CACCTGGGAC GTGAAGCGCA TGGTCAACGT CGAGGATCTG
GCGGCCCGCC CCTTCCTTGA ACTGCTGGGC GAACTGGGCC TGCCCACCCG TGTCATCGAC
GCCACCGGCG ACCACCCGCT GTAG
 
Protein sequence
MAKNVLIIGA GGVAQVVAHK VAQNAKEFGT LHIASRTVSK AEKIIASIRE KGHSVEFTAH 
PLDAMDSKAV AELIRGIEAG IVINVGSAFV NMTVLQGCID TGAAYIDTAI HEDPAKVCET
PPWYANYEWK RREDCAAAGV TAILGAGFDP GVVNAYARLA EDEYFDKIDS IDIVDINAGS
HGRWFATNFD PEINFREFTG TVYSWQGGEW RQNKMFEVGR EWDLPVVGKR TAYLSGHDEV
HSLSARYKDA DVRFWMGFGE HYINVFTVLK NLGLLSEQPV KTAEGQEVVP LKVVKAVLPD
PASLAPDYEG KTCIGDLVKG TLDGKPGEVF IYNVADHKDA YNEVGSQGIS YTAGVPPVAA
AILVARGTWD VKRMVNVEDL AARPFLELLG ELGLPTRVID ATGDHPL