| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2953 |
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| Symbol | |
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| ID | 4581520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 121116 |
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| End bp | 122165 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639770280 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_916733 |
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| Protein GI | 119385678 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.851486 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCGA CGCCAATCAT GGACGAATCG CGACAGATGC CCGGACACGA CCCCTCGCCC
GACCTCAACC AGCCGCGATT GCAGATCGGC TTCCTGCTGA CGCCGCGCTT CACGCTGTCG
GCCTTTGCCA CTTTCGTGGA CGTGCTGCGG CTGGCGGCCG ACGACGGCGA CGGCTCGCGC
CCCATCCGCT GCCGCTGGCG GGTGCTTTCG GCCGACATGG CGCCGGTGCA ATCCTCCTGC
GGCATGCGGA TCGAGCCCGA GGAACGGCTG GGCGATCCCG GCCGCTTCGA CTACATCATC
ACCGTGGGCG GGCTGATCGA CGGCGGCCCT GGCCTCTCGC CGGAACAGGC CGCCTTCCTG
CGCCGCGCCG CCATGGGGCG GGTGGCGCTC GGCGGACTTT GCACCGGGGT CTTCGCCATG
GCCCGCATCG GGCTGATGGA CGGTTATCGC TGCTGCGTAA GCTGGTTCCA CCATCAGGAT
TTCCTGGCGG AGTTCGAAAG GATGCGCCCG GTCTCGGACC AGATCTTCGT GGTGGACCGC
GACCGGATCT CCTGCTCGGG CGGGGTCAGC GCCGCGCATC TGGCCGCCTT CCTGATCGAC
CGGCACCTGG GCCGCGCCGC GGCGCGCAAG GCGCTGTCGA TCCTGATGAT CGACGAGCCG
ATGGCCGGCG ACCGCCCGCA GCCCGGCCTG CCGCTGGAAC TCAATGCCCG CGACCCGCTG
GTGCGCCGCG CCCTGCTGGC CATGCAGCAG AACCTGCACG CCCCCCTGCC AATCGCCCGC
ATCGCCAGGG ATCTGGGCGT CGGGCGGCGC AAGCTGGAAC GGCATTTCAA CGCCGACCTG
GGCATCCCGC CCGCCGATGC CTCGATCCGC ATCCGGCTGG CGCAGGCCCG CATGCTGCTG
GCGCGCACCG ACCGCACCGT CACCCGCATC GCCGAAGAGA CCGGCTTCTG CGACGCCTCG
CACCTGATCC GCGTCTTTCG CGAGACCGAG GGCACCACCC CCGACCTCTG GCGCCAGAAC
CGCGGCCTGC TGGCCGAGGA CGCCCCCTAG
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| Protein sequence | MIATPIMDES RQMPGHDPSP DLNQPRLQIG FLLTPRFTLS AFATFVDVLR LAADDGDGSR
PIRCRWRVLS ADMAPVQSSC GMRIEPEERL GDPGRFDYII TVGGLIDGGP GLSPEQAAFL
RRAAMGRVAL GGLCTGVFAM ARIGLMDGYR CCVSWFHHQD FLAEFERMRP VSDQIFVVDR
DRISCSGGVS AAHLAAFLID RHLGRAAARK ALSILMIDEP MAGDRPQPGL PLELNARDPL
VRRALLAMQQ NLHAPLPIAR IARDLGVGRR KLERHFNADL GIPPADASIR IRLAQARMLL
ARTDRTVTRI AEETGFCDAS HLIRVFRETE GTTPDLWRQN RGLLAEDAP
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