| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2944 |
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| Symbol | |
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| ID | 4581511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 111383 |
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| End bp | 113182 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639770271 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_916724 |
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| Protein GI | 119385669 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.858401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGA CCATCCCGCA AATCACCACC GGCCCGCTGC CCGGATCGCG CAAGATCCAT
GTGCCGGGCA GCCTGCACGA CATCCGCGTG CCCATGCGCG AGATCGCCGT CTCGAACGAG
CCGCCGCTGG TCGTCTATGA CAGCTCCGGC CCCTATACCG ACGCGGCGGT GCAGGCCGAC
ATCGCCCGCG GCCTGCCGGA CCTGCGCGGC GACTGGCAGC TGCGGCGCGG CGACGTGGCG
CCCTATCCCG GCCGGCAGGT CACCGCCGCC GACAACGGCT TTGCCGAGGG CGCGCGGCTG
ACCCCCGCCT TTCCGCTGCG CCGCGATCCC CTGCGCGCGG CGGCGGGCCG GGCGGTGACG
CAGCTGGCCT ATGCCCGCGC CGGCATCGTC ACCCCCGAGA TGGAGTTCGC GGCCATCCGC
GAGAACGAGG GGCGGCTGGT CGCCCATGCC CGCGACGGCG CGCCGATGGG GGCCGAGCTG
CCCGATCTGG TGACGCCGGA ATTCGTGCGG GCCGAGATCG CCGCCGGCCG CGCCATCATC
CCGGCCAACA TCAACCACCG CGAGTTGGAG CCGATGATCA TCGGCCGCAA TTTCAAGGTC
AAGATCAACG CCAATATCGG CAACTCCGCC GTCACCTCCA GCATGGAGGA GGAGGTCGAG
AAGATGGTCT GGGCGATCCG CTGGGGCGCG GACACGGTGA TGGACCTGTC CACCGGCCGC
AACATCCACA ACATCCGCGA CTGGATCATC CGCAACGCGC CGGTGCCCAT CGGCACCGTG
CCGCTGTATC AGGCGCTGGA GAAGGTCGGC GGCGTGGCCG AGGATCTGAG CTGGGAGGTG
TTTCGGGACA CGCTGGTCGA ACAGGCCGAG CAGGGCGTGG ACTATTTCAC CATCCATGCC
GGGGTGCGGC TGCACATGAT CCCGCTGACC GCGCGGCGGG TGACGGGGAT CGTCAGCCGC
GGCGGCTCGA TCATGGCGAA ATGGTGCCTG CACCACCACC GCGAGAGCTT CCTGTATGAG
CGCTTCGACG AGATCTGCGA GATCATGCAG GCCTATGACG TCAGCTTCAG CCTGGGCGAC
GGGCTGCGTC CCGGCTCGAT CGCCGATGCC AATGACGAGG CGCAATGCGC CGAACTGCGC
ACCCTGGGCG AGCTGACGAA GATCGCCTGG GCCCGGGATT GCCAGGTGAT GATCGAGGGG
CCGGGCCATG TGCCGATGCA CAAGATCAAG GCCAATATGG AGGAGCAGCT GCGGCATTGC
CACGAGGCGC CGTTCTATAC GCTTGGCCCG CTGACCACCG ATATCGCACC GGGCTACGAC
CACATCACCT CGGCCATCGG GGCGGCGATG ATCGGCTGGT TCGGCACGGC GATGCTGTGC
TATGTCACGC CCAAGGAGCA TCTGGGCCTG CCCGACCGCG ACGACGTCAA GACCGGCGTC
ATCACCTACA AGCTGGCCGC CCATGCCGCC GATCTGGCCA AGGGCCATCC CGGGGCGCAG
CGGCGCGACG ATGCGCTGTC GCGCGCGCGG TTCGAGTTCC GCTGGCAGGA CCAGTTCAAC
CTGGGCCTGG ACCCGGACAC CGCGCAGGCC ATGCATGACG AGACCCTGCC GAAAGAGGCG
CACAAGCTGG CGCATTTCTG TTCGATGTGC GGGCCGAAGT TCTGCTCGAT GCGGATCTCG
CACGACATCC GGGCCGAGGC TGAAAAGCAG GCCGGCATGG CGCGCATGGC CGAGAAGTTC
CGCGAGGGCG GGGCGCTTTA CCTGCCGGTT GCGGAAAGCG TGGCGGAGGC GGCCGATTGA
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| Protein sequence | MSQTIPQITT GPLPGSRKIH VPGSLHDIRV PMREIAVSNE PPLVVYDSSG PYTDAAVQAD
IARGLPDLRG DWQLRRGDVA PYPGRQVTAA DNGFAEGARL TPAFPLRRDP LRAAAGRAVT
QLAYARAGIV TPEMEFAAIR ENEGRLVAHA RDGAPMGAEL PDLVTPEFVR AEIAAGRAII
PANINHRELE PMIIGRNFKV KINANIGNSA VTSSMEEEVE KMVWAIRWGA DTVMDLSTGR
NIHNIRDWII RNAPVPIGTV PLYQALEKVG GVAEDLSWEV FRDTLVEQAE QGVDYFTIHA
GVRLHMIPLT ARRVTGIVSR GGSIMAKWCL HHHRESFLYE RFDEICEIMQ AYDVSFSLGD
GLRPGSIADA NDEAQCAELR TLGELTKIAW ARDCQVMIEG PGHVPMHKIK ANMEEQLRHC
HEAPFYTLGP LTTDIAPGYD HITSAIGAAM IGWFGTAMLC YVTPKEHLGL PDRDDVKTGV
ITYKLAAHAA DLAKGHPGAQ RRDDALSRAR FEFRWQDQFN LGLDPDTAQA MHDETLPKEA
HKLAHFCSMC GPKFCSMRIS HDIRAEAEKQ AGMARMAEKF REGGALYLPV AESVAEAAD
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