Gene Pden_2935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2935 
Symbol 
ID4581502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp98399 
End bp99337 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content67% 
IMG OID639770262 
Productphosphatidate cytidylyltransferase 
Protein accessionYP_916715 
Protein GI119385660 
COG category[R] General function prediction only 
COG ID[COG4589] Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.219644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGCT TTTACTCTCC CTCGGCCTTC GTGTTCTACG GGCTCTTCGC CTTCCTGGTC 
CTGGCCTCGC TGGTGGCGCG GTTCCTGATC CGCTCGGGGC GGGTCGGCGG CCCCACGGCG
CAGAACCTCG CCGACCGCAT CCGCGCCTGG TGGGTGATGA TCGGTGTGCT GGCGCTGATC
TTCACGCTGG GCGCCGGGGC GATCACGCTG TTCTTCGCGC TGTGTTCCAT GGCGGCGCTG
CGCGAATTCG CCACCATCAC CCATACGCGG CGCGACGACC ACGACGGGCT GGCCATCGCC
TTCTACCTGA TCCTGCCGCT GCAATACCTG CTGGTCTATT TCGAGGTGCC GGTCTTTGCC
GCGCTGCTGA TCCCGGTCTA CAGCTTCCTG CTGCTGCCGG TCGTGACCGT GTTCAAGGGC
GAGGTGCAGG GCTTCCTGAC CCGCGTCTCG GAAACGCAAT GGGGGCTGAT GGTCTGCGTC
TATTGCGTCT CGCATATCCC GGCGATCCTG ACGCTGGACA TTCCCTTCTA TCGCTACAGC
GCCTTCACGC TGGTGGCCTG GCTGATCCTG GTGGTGCAGG CATCCGACGT GCTGCAATAT
GTCTGGGGCA AGAGCATCGG CCGCCACCTG CTGGCGCCGC GCGTCTCGCC CTCCAAGACG
GTCGAGGGGC TGGCCGGCGG CATGCTCAGC GCCACGGCGC TGGGAATGGC GCTGACGCCG
ATCACGCCGT TCCTGTGGTG GGAGGCGGGG CTGATCGCCC TGACCGTCAC CGGCTTCGGC
ACGCTCGGCG GGCTCATCAT GTCGGCGATC AAGCGCGACC GCGGCGTCAA GGACTGGGGC
ACGCTGGTCC AGGGCCATGG CGGCATCCTG GACCGGCTGG ACAGCCTGGT CTTCTCGGCG
CCGGTATTCC TGCATATCCT GGCATGGGGG TGGATGTGA
 
Protein sequence
MDRFYSPSAF VFYGLFAFLV LASLVARFLI RSGRVGGPTA QNLADRIRAW WVMIGVLALI 
FTLGAGAITL FFALCSMAAL REFATITHTR RDDHDGLAIA FYLILPLQYL LVYFEVPVFA
ALLIPVYSFL LLPVVTVFKG EVQGFLTRVS ETQWGLMVCV YCVSHIPAIL TLDIPFYRYS
AFTLVAWLIL VVQASDVLQY VWGKSIGRHL LAPRVSPSKT VEGLAGGMLS ATALGMALTP
ITPFLWWEAG LIALTVTGFG TLGGLIMSAI KRDRGVKDWG TLVQGHGGIL DRLDSLVFSA
PVFLHILAWG WM