| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2921 |
|---|
| Symbol | |
|---|
| ID | 4581488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 83833 |
|---|
| End bp | 84576 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639770248 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_916701 |
|---|
| Protein GI | 119385646 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4106] Trans-aconitate methyltransferase |
|---|
| TIGRFAM ID | [TIGR02072] biotin biosynthesis protein BioC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0384761 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.654271 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGC TGGCCGGGCG GGTGGCGCGG TCATTCGCGC GCGGCATGAA AACCTATGAC
GGCGCGGCGC TGGCGCAGCG GCAGATCGCG GCGCGGCTGT TCGCAGCCTA TCGCGGCGCG
GCGGCGGGGC ATCGCCCGGC AAGGGTGCTG GAGGCGGGTT ATGGCTCGGG CCACCTGACC
CGGCACCTGC TGGAGTTGCG GCCCCGGCGG CTGTGGCTGA ACGACCTGGC GGCGCCGGAA
TTGCCGGGGG TCGCGGCGGA ATACCTGCCG GGCGACGTGG CCGAGGTGGC GTTGCCCGAG
GCGGTGGACC TGGCGGCCTC GGCCTCGACG ATCCAATGGG TTGCCGATCC GGCGCGGGTC
CTGGGCCGGC TGTGCCAGGC GGTGGCGCCG GGGGGCTGGC TGGCGATCTC GGGCTTTGCG
CCGGGGCATT TTCCCGAATT GCGGGCCCTG GGCAGCCGGG CGGCGGCGCC GTCCTATCTG
GCCGGGGCAG GGATGGCGGC GCTGCTGCCG GCGGGCTGGC GGGTCCGCGG CGCGGGGGAA
TGGCGCGTCA GGCTGCATTT CCCCGGCGCG CTGGAGGTGC TGCGCCATCT GCGCGCCACC
GGGGTCAACG GTTGCGCGGG GCAGTTCCGT TCGCCGGGCG CGCTGCGGGA TTTCATGGCG
CGCTACGAGG CGCAGCATGG CGGGGCGGGG GGCGTCGCGC TGACCTATGT CGCAAGCTGG
CTGGTGGCGG AGCGGCGCGC CTAG
|
|---|
| Protein sequence | MNALAGRVAR SFARGMKTYD GAALAQRQIA ARLFAAYRGA AAGHRPARVL EAGYGSGHLT
RHLLELRPRR LWLNDLAAPE LPGVAAEYLP GDVAEVALPE AVDLAASAST IQWVADPARV
LGRLCQAVAP GGWLAISGFA PGHFPELRAL GSRAAAPSYL AGAGMAALLP AGWRVRGAGE
WRVRLHFPGA LEVLRHLRAT GVNGCAGQFR SPGALRDFMA RYEAQHGGAG GVALTYVASW
LVAERRA
|
|---|
| |