Gene Pden_2916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2916 
Symbol 
ID4581483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp79269 
End bp80231 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content67% 
IMG OID639770243 
Productbiotin synthase 
Protein accessionYP_916696 
Protein GI119385641 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0502] Biotin synthase and related enzymes 
TIGRFAM ID[TIGR00433] biotin synthetase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.113509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.431828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAGC AATCGCGCAG CGCCGCCGAG ATCTATCACC AGCCGCTGAT GGACCTGCTG 
TTTCAGGCCC AGACCGTGCA TCGGGCGCAT TTCGACCCGA ATGTCGTGCA ATGTTCGAAG
CTCTTGTCGA TCAAGACCGG CGGCTGCCCC GAGGATTGCG CCTATTGCTC GCAATCGGCG
CGCAACGGCT CGGAACTGTC GGCCTCGAAA CTGATGGAGG TGCAGCGCGT GCTGGCCGAG
GCCAGGCGCG CCAAGGAGGC GGGGGCGACG CGCTATTGCA TGGGCGCCGC CTGGCGCTCG
CCCAAGGAGC GCGACATGCC GGCGGTGCTG GCGATGATCC GCGGCGTCAA GGCGATGGGG
ATGGAAACCT GCATGACGCT GGGCATGCTG GACGCGGACC AGGCGCTGCG GCTGAAGGAC
GCGGGGCTGG ATTACTACAA CCACAATATC GACACCTCGG AGCGCTATTA TTCCGAGATC
ATCACCACCC GGACCTTCCA GGACCGGATC GAGACGCTGG AGCGGGTGCA GGCGGCGGGC
ATCAATGTCT GCGCCGGCGG CATCGTCGGC ATGGGCGAGA CGGCCGAGGA CCGCATCTCG
ATGCTGGAGA CGCTGGCCGG GCTGGAGGTG CCGCCGCAAT CGGTGCCGAT CAACATGCTG
ATGCCGATGG CGGGCACGCC GCTGGCCGAT GTGCCCAGGC TGGACGCGAT CGAGATGGTG
CGCACCATCG CCACGGCGCG CATCCTGATG CCGGCATCCT ATGTGCGGCT GTCGGCCGGG
CGGTCCGAGA TGAGCGACGA GATGCAGGCC ATGTGCTTTT TTGCCGGGGC CAATTCGATC
TTTGTCGGCG ACACGCTGCT GACCGCCGGG AACCCGGACG AGGACAAGGA CGCGCTGCTG
TTCGCCAAGC TGGGGCTGCG GGCCGAGGTG CCGGAGGCGT CGCAGGAGGG CTGCGCGGCA
TGA
 
Protein sequence
MPQQSRSAAE IYHQPLMDLL FQAQTVHRAH FDPNVVQCSK LLSIKTGGCP EDCAYCSQSA 
RNGSELSASK LMEVQRVLAE ARRAKEAGAT RYCMGAAWRS PKERDMPAVL AMIRGVKAMG
METCMTLGML DADQALRLKD AGLDYYNHNI DTSERYYSEI ITTRTFQDRI ETLERVQAAG
INVCAGGIVG MGETAEDRIS MLETLAGLEV PPQSVPINML MPMAGTPLAD VPRLDAIEMV
RTIATARILM PASYVRLSAG RSEMSDEMQA MCFFAGANSI FVGDTLLTAG NPDEDKDALL
FAKLGLRAEV PEASQEGCAA