Gene Pden_2907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2907 
Symbol 
ID4581474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp69333 
End bp70514 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content71% 
IMG OID639770234 
Productacetyl-CoA acetyltransferases 
Protein accessionYP_916687 
Protein GI119385632 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.664042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG ATCCGATTGT CATCGTGGGC TCGGCCCGCA CGCCGATGGG CGGCTTCCAG 
GGCGATTTCG CCGGGGTCGA GGCCGCCGCG CTGGGCGCGA CCGCGATCAA GGCGGCGCTG
GGCGGGCTGG ACCCGCAGGC GGTGGACGAG ATCATCATGG GCTGCGTGCT GCCCGCCGGC
CAGGGCCAGG CCCCGGCGCG GCAGGCGGCG CTGGGCGCGG GCCTGCCCTT GGGCGCCGGC
GCCACGACCG TCAACAAGAT GTGCGGATCG GGCATGAAGG CGGCGATGCT GGGCCATGAC
CTGATCCTGG CCGGTTCCGC CGATGTGGTG GTGGCGGGCG GCATGGAGAG CATGTCGAAC
GCGCCCTATC TGCTGCCGAA GGCGCGGTCG GGCTATCGCA TGGGGCATGG GCAGGTGATG
GACCACATGT TCCTGGACGG GCTGGAGGAC GCCTATGACA AGGGCCGGCT GATGGGCACA
TTCGCCGAGG ATTGCGCCGA AGCCTATCAG TTCACGCGCG AGGCGCAGGA CGAGTTCGCG
ATTTCCTCGC TGACCCGGGC GCAGAAGGCC ATCGCCGCGG GGCATTTCAC GGGCGAGATC
GCGCCGGTGA CGGTCAGGGG GCGCGGCGGC GAGACGGTCG TGGATACCGA CGAGCAGCCG
GGCAAGGCGC GGCCGGACAA GATCCCGACC TTGAGGCCGG CCTTTCGCAA GGATGGCACG
GTGACGGCGG CGAACAGCTC CTCGATCTCG GACGGGGCGG CGGCGCTGGT GCTGATGCGG
GCGTCGGAGG CCGAGCGGCG CGGGCTGGTG CCGCGGGCGC GGATCCTTGG GCACGCGACC
TTTGCCGACA AGCCGGGCCT GTTTCCGACC GCGCCCATCG GCTCGGTCCG GCGGTTGCTG
GAGCGGACGG GGACGGCGAT CGGCGATTAC GACCTGTTCG AGGTCAACGA GGCTTTCGCG
GTGGTCGCCA TGGCGGCGAT GCGCGACCTT GGCCTGTCGC ATGATGCGGT GAACGTGCAT
GGCGGCGCCT GCGCGCTGGG CCATCCCATC GGCGCCTCGG GCGCGCGGGT GCTGGTGACG
CTGCTGGCGG CGCTGGAGAC GCATGGGGGC CGGCGCGGCA TCGCGTCGCT GTGCATCGGC
GGGGGCGAGG CGACGGCGGT GGCCATCGAG AGGATGCAAT GA
 
Protein sequence
MSTDPIVIVG SARTPMGGFQ GDFAGVEAAA LGATAIKAAL GGLDPQAVDE IIMGCVLPAG 
QGQAPARQAA LGAGLPLGAG ATTVNKMCGS GMKAAMLGHD LILAGSADVV VAGGMESMSN
APYLLPKARS GYRMGHGQVM DHMFLDGLED AYDKGRLMGT FAEDCAEAYQ FTREAQDEFA
ISSLTRAQKA IAAGHFTGEI APVTVRGRGG ETVVDTDEQP GKARPDKIPT LRPAFRKDGT
VTAANSSSIS DGAAALVLMR ASEAERRGLV PRARILGHAT FADKPGLFPT APIGSVRRLL
ERTGTAIGDY DLFEVNEAFA VVAMAAMRDL GLSHDAVNVH GGACALGHPI GASGARVLVT
LLAALETHGG RRGIASLCIG GGEATAVAIE RMQ