Gene Pden_2903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2903 
Symbol 
ID4581470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp64871 
End bp66049 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content70% 
IMG OID639770230 
Productaminodeoxychorismate lyase 
Protein accessionYP_916683 
Protein GI119385628 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID[TIGR00247] conserved hypothetical protein, YceG family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.167786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.431828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTGGC GCCACATCGC GTCGAATTTC CTGACGCTGC TGATCGTGAT CCTGATCGCG 
GTCGCGGCGG CCATCGCCTG GGGCAAGCAC GAATACACCC GGCCCGGCCC CAGCGCCGTG
GCCGCCTGCG TGCGCGTCGC CCCCGGCGCC AGCCTGAACG CGGTGAGCCA GCAGCTTGCC
GAGCAGGGCG TCGTCTCGAA CGCCTATGTG TTCCGGGCCG GGGCGGATTA CCAGGGCAAG
TCGCGCGATC TGAAATTCGG CTCTTACCTG ATGGCGCCGC AATCCAGCAT GGAGGACGTG
GTCAAGGTCA TCACCGCCGG CGGCCCCAGC ACCTGCGGCA CCGAGGTCCT GTTCCGCATC
GGCGTGCGGG AAAACTCGGT GATCCTGCGC GACATGGATG CCGAGACCGG GATGTTCGCC
GAACAGGCGA AATACAATCC CGCCAGCGAG CCCGCGCCCG AGGTCATTAC CGCCGCGGAG
GCGAAGCCGG ATGCGCGGCT GCGCATCCTG GTCGCCGAGG GCGTGACCAG CTGGCAGGTG
GCCGAGGGGC TGAAGCAGGC CGGGTTCCTG GACGGCGAGG TCTCGAAGCT GCCGGGGGAG
GGGAGCCTGG CGCCCGACAC CTATGACGTC GAGAAGGGCG CCGACCGCGC CGCGCTACTG
GCCGAGATGG AGCGGCGGCA GGCGGCGATC CTGGCCGCGG CCTGGGAGGC GCGCGAGCCC
GACCTGCCCT ATGCGACGCC CGAGGAGGCG CTGGTCATGG CCTCGATCAT CGAGAAGGAG
ACGGGCGTTC CGAACGAGCG CCGGATGGTG GCCAGCGTAT TCGTCAACCG GATGCGGCGC
GGCATGCGGC TGGAGACCGA CCCGACGGTG ATCTATGGCG TCACCGAGGG CAAGGGGGTG
CTGGACCGCG GCATCCGCGC CTCGGAACTG CGGCGGCGCA CGCCCTACAA CACCTATCAG
ATCGACGGGC TGCCGCCGAC GCCGATCGCC AATCCGGGCC GGGCCGCCAT CGCGGCGGCG
ATGGACCCGG AGGATACGGA TTACGTCTTT TTCGTCGCCG ACGGCTCGGG CGGGCACGCC
TTTGCCCGCA CGCTGGAGGA GCACAACCGC AACGTCGCCC GCTGGCGCGA GATCGAGCGC
CAGCGCGGAG AGCCGCTGTC GCCGGTGCAG GGCGACTGA
 
Protein sequence
MIWRHIASNF LTLLIVILIA VAAAIAWGKH EYTRPGPSAV AACVRVAPGA SLNAVSQQLA 
EQGVVSNAYV FRAGADYQGK SRDLKFGSYL MAPQSSMEDV VKVITAGGPS TCGTEVLFRI
GVRENSVILR DMDAETGMFA EQAKYNPASE PAPEVITAAE AKPDARLRIL VAEGVTSWQV
AEGLKQAGFL DGEVSKLPGE GSLAPDTYDV EKGADRAALL AEMERRQAAI LAAAWEAREP
DLPYATPEEA LVMASIIEKE TGVPNERRMV ASVFVNRMRR GMRLETDPTV IYGVTEGKGV
LDRGIRASEL RRRTPYNTYQ IDGLPPTPIA NPGRAAIAAA MDPEDTDYVF FVADGSGGHA
FARTLEEHNR NVARWREIER QRGEPLSPVQ GD