| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2898 |
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| Symbol | |
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| ID | 4581465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 59644 |
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| End bp | 60810 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639770225 |
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| Product | HK97 family phage major capsid protein |
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| Protein accession | YP_916678 |
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| Protein GI | 119385623 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
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| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.593833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.443807 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGG TGAAAGCCGC GGCCGGGGCG GACGTGCCCG GCGACCTGGG GGCCGAGATG
CTGGGCTTTG TCCAGGAGTT GAAGGCATTC CGCAGCGAGA TTCAGAACCG ATTGGAAGCA
CAGGAAGAAC GCATGACCAT GCTGGACCGC AAGACGATTT CCCGCCCCCG CGCGCCCCTG
TCGGTCGAGG CCGATCAGGG CGCGCCGCAT CAGAAGGCCT TTGACGCCTA TATCCGCCAC
GGCGACGACG GCGCGCTGCG CGGGCTGCCG CTGGAGGGCA AGGCGATGAC CTCGACCTCG
GACGGGGGGT TCCTGGCGGC GCCGACGGTG GCGATGCAGG TGCAGGAGGC GCTGAACGTC
ACCGCCTCGC TGCGGCGCGT GGCCAATGTG GTGGCGGTGG AATCGGCGAG CTACGAGGTG
CTGGTCGACA TGGGCGACAT CGCCCATGGC TGGGCCAGCG AGGCCGCGGC CCAGGCCGAG
ACCGGCACGC CCAGCGTGCA GCGGGTGGTG ATCCCGGTGC ACGAGCTTTC GGCCATGCCC
AAGGCCAGCC AGCGCCTGCT GGACGACGCG GCCTTCGACG TCGAGACCTG GCTGGCCGGG
CGGATCGCCG AGAAATTCGC CCGCGCCGAG GCCACGGCCT TTATCAGCGG CGACGGGGTG
AACAAGCCGC GCGGCATCCT GACCCATGCG AAGGCGCCGA ACGGCAGCGC GACCAATGTG
CAGATCGGCA CCATCCCGTC GGGCGGGACC GGCGATTTCG CCGCGACCAA TCCGGCCAAT
GCGCTGATCG ACCTGGTCTA TGCGCTGGGC GCGCAATACC GCGCCAATGC GAGCTTCGTG
ATGAATTCCA AGACCGCCGC GGCGGTGCGC AAGATGCGCG ATGCGGACGG CCGCTTCCTG
TGGGCGGACA GCCTGGCCAT GGGGCAGCCG GCGCAGCTGC TGGGCTATCC GGTGCTGGTC
TGCGAGGACA TGCCGGACAT CGCGCAGGGC TCGCATTCCA TCGCCTTCGG CGATTTCCGC
TCGGCCTATA CCATCGTCGA GCGGCCGGAT CTGCGGGTGC TGCGCGACCC GTTCTCGGCC
AAGCCGCATG TGCTGTTCTA TGCCAGCAAG CGCGTCGGCG GCGGCGTCAC CGATGCGCGC
GCCGTCAAGC TGATGGTCTT TGGCTGA
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| Protein sequence | MTEVKAAAGA DVPGDLGAEM LGFVQELKAF RSEIQNRLEA QEERMTMLDR KTISRPRAPL
SVEADQGAPH QKAFDAYIRH GDDGALRGLP LEGKAMTSTS DGGFLAAPTV AMQVQEALNV
TASLRRVANV VAVESASYEV LVDMGDIAHG WASEAAAQAE TGTPSVQRVV IPVHELSAMP
KASQRLLDDA AFDVETWLAG RIAEKFARAE ATAFISGDGV NKPRGILTHA KAPNGSATNV
QIGTIPSGGT GDFAATNPAN ALIDLVYALG AQYRANASFV MNSKTAAAVR KMRDADGRFL
WADSLAMGQP AQLLGYPVLV CEDMPDIAQG SHSIAFGDFR SAYTIVERPD LRVLRDPFSA
KPHVLFYASK RVGGGVTDAR AVKLMVFG
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