Gene Pden_2894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2894 
Symbol 
ID4581422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp57709 
End bp58122 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content67% 
IMG OID639770221 
ProductTP901-1 family phage major tail protein 
Protein accessionYP_916674 
Protein GI119385619 
COG category[S] Function unknown 
COG ID[COG5437] Predicted secreted protein 
TIGRFAM ID[TIGR02126] phage major tail protein, TP901-1 family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.232162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTGC AGAACGGACG CGACCTGCTG ATCAAGATGG ACATGACCGG CGACGGCCAT 
TTCGAGACCG TGGCGGGGCT GCGGGCGACC CGGCTGGGCT TCAACGCCGA GACGGTGGAC
GTGACGAGCC TGGAAAGCGA GGGGCGCTGG CGCGAATTGC TGGCGGGTGC GGGGGTCAGG
TCGGCCAGCA TCTCGGGCTC GGGCGTGTTC CGGGACGGGA CCACGGACGA ACGCGCGCGG
CAGGTGTTCT TTGACGGCGA GGTGCCGCGC TTCCAGGTGG TGATCCCGGG TTTCGGCACC
GTCGAGGGGC CGTTCCAGAT CACCGCGCTG GAATATGCGG GCAGCTATAA TGGCGAGGCG
ACCTATGAGA TTTCCATGGC AAGCGCCGGG GCGATCAGCT TCGTCGCGTT CTGA
 
Protein sequence
MAVQNGRDLL IKMDMTGDGH FETVAGLRAT RLGFNAETVD VTSLESEGRW RELLAGAGVR 
SASISGSGVF RDGTTDERAR QVFFDGEVPR FQVVIPGFGT VEGPFQITAL EYAGSYNGEA
TYEISMASAG AISFVAF