Gene Pden_2890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2890 
Symbol 
ID4581418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand- 
Start bp55851 
End bp56492 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content71% 
IMG OID639770217 
Producthypothetical protein 
Protein accessionYP_916670 
Protein GI119385615 
COG category[S] Function unknown 
COG ID[COG5448] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02217] conserved hypothetical protein TIGR02217 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0594932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones7 
Fosmid unclonability p-value0.240376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGAGA TGGCGTTTCA TGAGATCAGG TTCCCGGCGA ACCTGTCCTT CGGCTCGGTC 
GGGGGGCCAG AGCGGCGCAC CGAGATCGTC GCGCTGACCA ACGGCCACGA GGAGCGGCGC 
ACCCCCTGGG CGCATTCGCG GCGGCGCTAC GACGCCGGGC TGGGGCTGCG CTCGCTGGAC 
GACGTGGCGG CGCTGGTCGC CTTTTTCGAG GCGCGGGCCG GGCAGATGCA CGGCTTTCGC 
TGGAAGGACT GGGCGGATTT CAAATCCTGC GCGCCAGGCG CGGCGGTGAG TTTCCAGGAT 
CAGGAGATCG GCATGGGCGA CGGGGTGCGG CGGGATTTCG CGCTGCGCAA GGCCTATGCC 
TCGGGGCCGG CGCGCTATTG GCGGCCGGTG GCGAAGCCGG TCGAGGGCAC GGTGCTGGCC 
GGCGCGGGAC ATGTCGAATT GCGCGCGGGG GTGGATTTCG CGGTGGACAT GGCGACGGGG 
GTCTTGCGCT TTGCCGCGCC GCCCGAGGCG GGGGCCGTGG TCACGGCGGG GTTCGAGTTC 
GACGTGCCGG TGCGCTTCGA CACGGATCGG ATCGCGGTCT CGGTCGCCTC GTTCCAGGCG 
GGCGACCTGC CGCAGGTCCC GGTGGTGGAG GTGCGGCTAT GA
 
Protein sequence
MGEMAFHEIR FPANLSFGSV GGPERRTEIV ALTNGHEERR TPWAHSRRRY DAGLGLRSLD 
DVAALVAFFE ARAGQMHGFR WKDWADFKSC APGAAVSFQD QEIGMGDGVR RDFALRKAYA 
SGPARYWRPV AKPVEGTVLA GAGHVELRAG VDFAVDMATG VLRFAAPPEA GAVVTAGFEF 
DVPVRFDTDR IAVSVASFQA GDLPQVPVVE VRL