| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2889 |
|---|
| Symbol | |
|---|
| ID | 4581417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 55036 |
|---|
| End bp | 55854 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639770216 |
|---|
| Product | phage protein |
|---|
| Protein accession | YP_916669 |
|---|
| Protein GI | 119385614 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5449] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02218] phage conserved hypothetical protein BR0599 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0194233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.242623 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGGA CGATCGCGCG GGCCTGGGCG GTCCGGCGGT GCGACGGGCT GGTGCTGGGG
TTTACCGATC ACGACCGGGC GCTGTCCTTT GAGGGCATCG CGTTCCGCCC CGACAGCGGG
CTGAGCGCGC GGGCGGTGGT GCAGGGCCTG GGCCTGTCGG TGGACAACAG CGAGGCGGTG
GGCGCGCTGT CGGACGCGGC GATCACCGAG CGCGACCTGA TGGCCGGGCG CTGGGACGCG
GCCGATGTGC GGCTGTGGGA GGTGGACTGG TCCGATGCCG CGAACCGGCG GCTGATCTTT
CGCGGTCATC TGGGCGAGGT GGTGCGCAGC GGCGCGGCCT TCCGGGCCGA GCTGCGCGGG
CTGTCCGAGC CTTTGAACCG GGCGCAGGGG CGGGTCTATC ACCCGCGCTG CGCGGCCGTG
CTGGGGGACG GGCTGTGCCG GTTCGACCTG ACGCGCGCCG GCTATTCGGC CGAGGGCGTG
GTCGTCCTGG AAGAGGGGGA TCGGCTGGAG CTGTCGGGCG TGGCCGGGCA TGACGCAGGG
TGGTTCGAGC ATGGGCAGCT TGTGGTGCTG TCGGGCGCGG CCGAGGGGCT GTCGGGCATG
GTCAAGGCGG ATGCCGCCCT GCCCGGCGGC CGGCGCGAGG TCGGGCTTTG GACCGCGCTG
GGCATCCGGC CCGCCCCGGG CGACCGGGTG CGGCTGCTGG CCGGATGCGA CAAGCGGGCC
GAGACCTGCC GGATGAAGTT CCTGAACTAC CTGAACTTTC GCGGCTTTCC ACATTTGCCG
CCCGAGGACT GGCTGATCGC GCCCAAGGTG AATCGATGA
|
|---|
| Protein sequence | MSGTIARAWA VRRCDGLVLG FTDHDRALSF EGIAFRPDSG LSARAVVQGL GLSVDNSEAV
GALSDAAITE RDLMAGRWDA ADVRLWEVDW SDAANRRLIF RGHLGEVVRS GAAFRAELRG
LSEPLNRAQG RVYHPRCAAV LGDGLCRFDL TRAGYSAEGV VVLEEGDRLE LSGVAGHDAG
WFEHGQLVVL SGAAEGLSGM VKADAALPGG RREVGLWTAL GIRPAPGDRV RLLAGCDKRA
ETCRMKFLNY LNFRGFPHLP PEDWLIAPKV NR
|
|---|
| |