Gene Pden_2886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2886 
Symbol 
ID4581414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp49990 
End bp50712 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content72% 
IMG OID639770213 
Producthypothetical protein 
Protein accessionYP_916666 
Protein GI119385611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0470567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.128421 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGA ACACGACCGC GAATTGCGCC CTGCCGCTGC TGATGCCGGC GCAGGCGCAG 
AAGCATGTCA CGGTGAACGA GGCGCTGATG CGCCTGGACG GGCAGGTCGA TCTGGTCCTG
CAAAGCCTGA CCCGCATCAC CCCGCCCGAG ACGGTGGTGG ACGGGCTGTG CTGGGGCGTG
CCGCAGGGCG CGGTCAACGC CTGGGAGGGG CAGGGCGGCA AGATCGCCAT CGGGGCGAAT
GGCGGCTGGA TCTTTGTCCA GCCGGGTTTC GGCCGGCGTG CCGTCGTTGC CGACCAGGGG
GTGGTGGCGA TCCATGGCGG CGCGGGATGG GTGCCGGGTG CGGTGACATT GGGCCAGCAC
GGATCGGGGT TGCTGGCGCG GCAGCTCTTG GAGGATGTGA CGCTGGGCGC GGGCGCCTGG
TTCGAGACGG CGATGGCCAT TCCGCCCGGC GCGCTGGTCA TCGGGGCTGC GGCGCGGGTG
CAGGAGGCGA TCACCGGCAG CGCCGCGTCG TGGTCGCTGG GCACGGTGGG CGATGCCGGC
AGCCTTGCGC GCTTTGGGCA GGGGCTGGGC AAGGCCCAGG GATCCTGGGC GCGGGGCGTG
CTGTCGCCGC CCATGGCGTT CTGGGAGCCG ACGCCGCTGC GGCTGACGGC AGTGGGCGGG
CAGTTCGCCG GCGGCAAGGT GCGGGTGGTG CTGCATTGGT GGGAATTGCG GCTGCCGGAT
TGA
 
Protein sequence
MPENTTANCA LPLLMPAQAQ KHVTVNEALM RLDGQVDLVL QSLTRITPPE TVVDGLCWGV 
PQGAVNAWEG QGGKIAIGAN GGWIFVQPGF GRRAVVADQG VVAIHGGAGW VPGAVTLGQH
GSGLLARQLL EDVTLGAGAW FETAMAIPPG ALVIGAAARV QEAITGSAAS WSLGTVGDAG
SLARFGQGLG KAQGSWARGV LSPPMAFWEP TPLRLTAVGG QFAGGKVRVV LHWWELRLPD