Gene Pden_2882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2882 
Symbol 
ID4581410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp45967 
End bp47568 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content66% 
IMG OID639770209 
Product5'-nucleotidase domain-containing protein 
Protein accessionYP_916662 
Protein GI119385607 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.255702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCT GGCTCATGGT TTCGGCGGCA ATCGTCGCGC TGTCTTCGGG CGCGGCGCAG 
GCGGACTACA CGCTGCATGT GCTGCATATC AACGATTTCC ACAGCCGGAT CGAGCCGATC
AACGCCTTTG ACAGCACCTG CGACGCCGAG ACCGAGGCGA AGGGCGAATG CTTCGGCGGC
GTGGCGCGTC TGGCGACGAA GATCCGCGAG TTGCGCGACG GGCTGAAGGC CGACGGCCAG
AACGTCATCG TGCTGGATGC GGGCGACCAA TACCAGGGCA GCCTGTTCTA TACGACCTAC
AAGGGCAAGG ACACGGTCGA GTTCATGAAC GCCATCGGCT TCGACGCCAT GGCGGTGGGC
AACCACGAGT TCGACGACGG GCCGCAGGGG CTGCAAATCC TGGTCGAGGG CGTCACGTTT
CCTGTCGTCT CGGGCAACCT GGACCTGTCG CAATCGCCCG AACTGAAGGA TAAGGTCGGC
GACGTGCTGG TGCTGGATGT CGGCGGCGAG AAGGTGGGGA TCGTCTCGGC CCTGGCGATG
GACACGCCCG AGACCGCCGC GCCCGGCGAC AAGGTCATCT TCATGGACGA CATGGACAGC
CTGAAGGCCG ATGTCCAGGA ACTGACCGAC CAGGGCGTGG ACAAGATCAT CGCCCTGACC
CATTCCGGTT TCAAGCGCGA CCAGGAATTC GCGGCCGAGG TCGCCGGGAT CGACGCGGTC
ATCGGCGGCC ACAGCCACAC GCTGCTGGGC CAGGTCGAGG GCGCTGCCGG ACCCTATCCG
ACCATGGTCA AGGGCGCGGA TGGCGCCGAA GTGCCGGTGG CGACCGCCTA TGCCTATGGC
AAATACCTGG GCCATCTGGT GCTGACCTGG GACGACGAGG GCAAGCTGGT CAAGGCCGAG
GGGCAGCCGA TCCTGCTGGA CGGCTCGGTC GTGCCGGACG AGAAGCTGGC CGCGCGGGTC
AAGGAGATGG CCGCGCCCAT CGAGCAGCTC AAGCAGAAGC GCGTGGCCGA GATCGCGGCG
CCCATCGACG GCAGCCGGGA AACGTGCCGG GCACAGGAAT GCGAGATGGG CAGCCTGGTG
GCCGACGCCA TGCTGGCGCG CGTCAAGGAC CAGGGCATCA CCATCGCGAT CCAGAACGGC
GGGGGCTTGC GCGCCTCGAT CCCGGCGGGA GTGGTGACGA TGGGCGACGT GCTGTCGGTG
CTGCCCTTCC AGAACACGCT GTCGACGTTC CAGCTGAAGG GCGCGGATGT GGTCGAGGCG
CTGGAAAACG GTGCAAGCCA GATCGAGGAG GGCGCCGGGC GCTTTGCCCA GGTCGCCGGG
CTGAAATACA CGCTGGACCC CTCGGCGCCC GCCGGCAGCC GGATCAGCGA CGTGCAGGTG
CGCGACGGTT CGGAATGGGT GCCGATCGAC CGCGAGGCGG TCTATGGCGT GGTGTCGCAG
AACTACATGC GCGCCGGCGG GGACGGCTAC AAGGTCTTTG CCGAGCATGC GATGAACGCC
TATGATTTCG GCCCGGACCT GGCGGATGTG CTGGCCGAAC ATCTGGCCAG GCAGGGGCCG
GATTTCACGC CGAAGCTGGA TGGCCGCATC ACCGTGAAAT GA
 
Protein sequence
MKRWLMVSAA IVALSSGAAQ ADYTLHVLHI NDFHSRIEPI NAFDSTCDAE TEAKGECFGG 
VARLATKIRE LRDGLKADGQ NVIVLDAGDQ YQGSLFYTTY KGKDTVEFMN AIGFDAMAVG
NHEFDDGPQG LQILVEGVTF PVVSGNLDLS QSPELKDKVG DVLVLDVGGE KVGIVSALAM
DTPETAAPGD KVIFMDDMDS LKADVQELTD QGVDKIIALT HSGFKRDQEF AAEVAGIDAV
IGGHSHTLLG QVEGAAGPYP TMVKGADGAE VPVATAYAYG KYLGHLVLTW DDEGKLVKAE
GQPILLDGSV VPDEKLAARV KEMAAPIEQL KQKRVAEIAA PIDGSRETCR AQECEMGSLV
ADAMLARVKD QGITIAIQNG GGLRASIPAG VVTMGDVLSV LPFQNTLSTF QLKGADVVEA
LENGASQIEE GAGRFAQVAG LKYTLDPSAP AGSRISDVQV RDGSEWVPID REAVYGVVSQ
NYMRAGGDGY KVFAEHAMNA YDFGPDLADV LAEHLARQGP DFTPKLDGRI TVK