Gene Pden_2875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2875 
Symbol 
ID4581462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp41880 
End bp42527 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content69% 
IMG OID639770202 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_916655 
Protein GI119385600 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.616396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCC GTATTTCGCT GCTTCTCGCC TCTGCCGGCT TGATCGCCAT CAGCGCCTGC 
ACGCCGGCCG ATCCCTACGG CCAGCCCCAG CAGACCAGCC GCACCCAGCA GGGCGCCATC
GCCGGCGCGG TCGTCGGCGG CCTGATCGGC GCAGGCGAAA GCCGCTCGAA TGCCGTCAAG
GGCGCGATCA TCGGCGCGAC GGCGGGCGCC GTCGGCGGCT CGATCCTCGA CCAGCAGCAG
CGTTCGTTGC AGCAGTCGCT GAACAACCCC AACATCCAGA TCGTGAACCA CGGCACCCAT
CTGTCGGTCG TCATGCCGGA ATCCACGCTG TTCGCCACCG ATTCGGCCGC CGTGGGCGCT
CAGGGGCAAA ACGACCTCTA CACCATCGCG CGCAACCTCA CCCAGTATCC CAACAGCCGC
ATCCAGATCG TCGGCCATAC CGACAGCACC GGCTCGGCCG CCTATAACCA GGACCTGTCC
GAACGCCGCG CGCGCTCGGT CGCCGGCATC CTGACCGCCG GCGGCGTGGC GCAATCGCGC
GTCACCACCC TGGGCCGCGG CGCCACCCAG CCGGTCGCCT CGAACGACAC GGCCGCGGGC
CGCGCCCAGA ACCGCCGCGT GGAAATCCTG ATTACCCCGA CCCGCTGA
 
Protein sequence
MKTRISLLLA SAGLIAISAC TPADPYGQPQ QTSRTQQGAI AGAVVGGLIG AGESRSNAVK 
GAIIGATAGA VGGSILDQQQ RSLQQSLNNP NIQIVNHGTH LSVVMPESTL FATDSAAVGA
QGQNDLYTIA RNLTQYPNSR IQIVGHTDST GSAAYNQDLS ERRARSVAGI LTAGGVAQSR
VTTLGRGATQ PVASNDTAAG RAQNRRVEIL ITPTR